RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 SLC29A4Q7RTT9 530 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 ZNF417Q8TAU3 575 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 RBPMSQ93062 196 aaKnown RBP11.39□□□□□ -0.59
LMX1A-202ENST00000342310 ZNF587Q96SQ5 575 aaPredicted RBP11.39□□□□□ -0.59
LMX1A-202ENST00000342310 ZNF649Q9BS31 505 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 ACTR6Q9GZN1 396 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 DLL4Q9NR61 685 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 PRR13Q9NZ81 148 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 ST6GALNAC2Q9UJ37 374 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 NPIPA1Q9UND3 350 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 PCDHGA5Q9Y5G8 931 aa11.39□□□□□ -0.59
LMX1A-202ENST00000342310 COL6A3P12111 3177 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 SLC33A1O00400 549 aaPredicted RBP11.38□□□□□ -0.59
LMX1A-202ENST00000342310 NKX2-2O95096 273 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 WISP1O95388 367 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 HLA-DOBP13765 273 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 S1PR1P21453 382 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 GMFBP60983 142 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 CAMK2DQ13557 499 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 TRAM1Q15629 374 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 AANATQ16613 207 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 WBP2NLQ6ICG8 309 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 OR52W1Q6IF63 320 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 UNQ6126/PRO20091Q6UXV3 157 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 BTN2A1Q7KYR7 527 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 OR4C16Q8NGL9 310 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 KLHL15Q96M94 604 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 STACQ99469 402 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 TIMP4Q99727 224 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 LRRC61Q9BV99 259 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 MFFQ9GZY8 342 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 LYRM4Q9HD34 91 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 ISYNA1Q9NPH2 558 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 MRPS18AQ9NVS2 196 aaKnown RBP11.38□□□□□ -0.59
LMX1A-202ENST00000342310 TAS2R4Q9NYW5 299 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 MRM2Q9UI43 246 aaKnown RBP11.38□□□□□ -0.59
LMX1A-202ENST00000342310 A0A087WUJ7 227 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 PTP4A3O75365 173 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 DCNP07585 359 aaKnown RBP11.38□□□□□ -0.59
LMX1A-202ENST00000342310 RORAP35398 523 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 ARFRP1Q13795 201 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 RAB11BQ15907 218 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 BEST3Q8N1M1 668 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 OR2G2Q8NGZ5 317 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 HAVCR2Q8TDQ0 301 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 SMIM4Q8WVI0 70 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 SEMA6CQ9H3T2 930 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 LMAN1LQ9HAT1 526 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 COL4A4P53420 1690 aaPredicted RBP11.38□□□□□ -0.59
LMX1A-202ENST00000342310 CXorf51AA0A1B0GTR3 108 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 TMEM269A0A1B0GVZ9 245 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 ACOT7O00154 380 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 AGPAT2O15120 278 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 ZNHIT1O43257 154 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 KLF4O43474 513 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 PGAM2P15259 253 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 SPINK2P20155 84 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 ACHEP22303 614 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 CXADRP78310 365 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 PLAURQ03405 335 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 EIF2B5Q13144 721 aaKnown RBP11.38□□□□□ -0.59
LMX1A-202ENST00000342310 BPHLQ86WA6 291 aaPredicted RBP11.38□□□□□ -0.59
LMX1A-202ENST00000342310 GRAMD2AQ8IUY3 354 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 NUDCD2Q8WVJ2 157 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 ST8SIA4Q92187 359 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 FOXQ1Q9C009 403 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 TINAGL1Q9GZM7 467 aaPredicted RBP11.38□□□□□ -0.59
LMX1A-202ENST00000342310 FSCN3Q9NQT6 498 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 CUTCQ9NTM9 273 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 EPHA6Q9UF33 1036 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 CHRNA9Q9UGM1 479 aa11.38□□□□□ -0.59
LMX1A-202ENST00000342310 CACNA1HO95180 2353 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 DIDO1Q9BTC0 2240 aaKnown RBP11.37□□□□□ -0.59
LMX1A-202ENST00000342310 A0A0G2JK05 382 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 AIPO00170 330 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 CDK2AP1O14519 115 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 TRAPPC2P0DI81 140 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 TRAPPC2BP0DI82 140 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 IL11P20809 199 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 SCRN3Q0VDG4 424 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 FZD2Q14332 565 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 C2orf76Q3KRA6 126 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 METTL11BQ5VVY1 283 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 WNT2BQ93097 391 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 FAM3DQ96BQ1 224 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 RTN4RQ9BZR6 473 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 GHITMQ9H3K2 345 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 ANKRD10Q9NXR5 420 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 B3GNT2Q9NY97 397 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 SCP2D1Q9UJQ7 156 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 NUP50Q9UKX7 468 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 TOR1AO14656 332 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 FOXS1O43638 330 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 SUSD5O60279 629 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 H2BFMP0C1H6 154 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 NFYAP23511 347 aaPredicted RBP11.37□□□□□ -0.59
LMX1A-202ENST00000342310 BTCP35070 178 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 NUP54Q7Z3B4 507 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 PHOSPHO2Q8TCD6 241 aa11.37□□□□□ -0.59
LMX1A-202ENST00000342310 VSTM2LQ96N03 204 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms