RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 ANKRD37Q7Z713 158 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 TSPAN10Q9H1Z9 355 aaPredicted RBP17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 MAB21L2Q9Y586 359 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 TMEM129A0AVI4 362 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 SURF4O15260 269 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 CBX7O95931 251 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 IL2RGP31785 369 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 CLDN12P56749 244 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 PCBP4P57723 403 aaKnown RBP17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 SLC14A1Q13336 389 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 RHBDD2Q6NTF9 364 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 EXD3Q8N9H8 876 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 SPIN2AQ99865 258 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 SPIN2BQ9BPZ2 258 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 TXNIPQ9H3M7 391 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 EMC7Q9NPA0 242 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 OR2S2Q9NQN1 319 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 SLC6A13Q9NSD5 602 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 PCOLCE2Q9UKZ9 415 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 ATG2BQ96BY7 2078 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 SMCO3A2RU48 225 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 GALEQ14376 348 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 CLDN22Q8N7P3 220 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 OR6F1Q8NGZ6 308 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 LIPHQ8WWY8 451 aa17.85■□□□□ 0.45
SEMA6C-201ENST00000341697 TDRD15B5MCY1 1934 aaKnown RBP17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 TRDV1A0A1B0GX56 115 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 SLC34A2O95436 690 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 SSPNQ14714 243 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 SFXN4Q6P4A7 337 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 OR6V1Q8N148 313 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 ASCC1Q8N9N2 400 aaKnown RBP17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 OR5D18Q8NGL1 313 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 CENPOQ9BU64 300 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 TIMM10BQ9Y5J6 103 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 MCRIP1C9JLW8 97 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 GREM1O60565 184 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 PRAF2O60831 178 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 SCGB2A1O75556 95 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 VEGFCP49767 419 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 DIO1P49895 249 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 CYCSP99999 105 aaKnown RBP17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 PWWP2BQ6NUJ5 590 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 WDR88Q6ZMY6 472 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 NANOGP1Q8N7R0 232 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 ZNF286AQ9HBT8 521 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 SLC25A19Q9HC21 320 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 TREM1Q9NP99 234 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 MBD1Q9UIS9 605 aaPredicted RBP17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 D6RAR5 112 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 IKZF1Q13422 519 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 OR1C1Q15619 314 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 PRICKLE4Q2TBC4 344 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 FBXL4Q9UKA2 621 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 SLC2A10O95528 541 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 UQCRC1P31930 480 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 CX3CR1P49238 355 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 ZMAT1Q5H9K5 638 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 NKAIN3Q8N8D7 197 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 NICN1Q9BSH3 213 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 OSGIN1Q9UJX0 560 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 PROCRQ9UNN8 238 aa17.84■□□□□ 0.45
SEMA6C-201ENST00000341697 ASPDHA6ND91 283 aa17.83■□□□□ 0.45
SEMA6C-201ENST00000341697 ZNF93P35789 620 aaPredicted RBP17.83■□□□□ 0.45
SEMA6C-201ENST00000341697 LIPNQ5VXI9 398 aa17.83■□□□□ 0.45
SEMA6C-201ENST00000341697 OR4K15Q8NH41 348 aa17.83■□□□□ 0.45
SEMA6C-201ENST00000341697 S1PR5Q9H228 398 aa17.83■□□□□ 0.45
SEMA6C-201ENST00000341697 ERVMER34-1Q9H9K5 563 aa17.83■□□□□ 0.45
SEMA6C-201ENST00000341697 TNFSF11O14788 317 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 SC5DO75845 299 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 IGHV4-34P06331 123 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 IL7P13232 177 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 NAGAP17050 411 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 RBM39Q14498 530 aaKnown RBP17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 ZNF610Q8N9Z0 462 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 FAM173AQ9BQD7 235 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 ASH2LQ9UBL3 628 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 SLC22A5O76082 557 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 SLC2A1P11166 492 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 TIAL1Q01085 375 aaKnown RBP eCLIP17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 CLPPQ16740 277 aaPredicted RBP17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 UBE2UQ5VVX9 321 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 METAP1DQ6UB28 335 aaPredicted RBP17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 ARHGDIGQ99819 225 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 ARL6Q9H0F7 186 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 MED29Q9NX70 200 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 B3GNT2Q9NY97 397 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 B3GAT1Q9P2W7 334 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 TRAV17A0A0B4J275 112 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 ZNF891A8MT65 544 aaPredicted RBP17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 ARPC1BO15143 372 aaKnown RBP17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 ZNF254O75437 659 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 PLGLAQ15195 96 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 KIF18BQ86Y91 864 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 PARP16Q8N5Y8 322 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 RAB3CQ96E17 227 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 GPATCH2Q9NW75 528 aa17.83■□□□□ 0.44
SEMA6C-201ENST00000341697 PRSS37A4D1T9 235 aa17.82■□□□□ 0.44
SEMA6C-201ENST00000341697 FAM76BQ5HYJ3 339 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms