RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 C10orf128Q5T292 105 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 C11orf71Q6IPW1 123 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 RRM2BQ7LG56 351 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 HDDC2Q7Z4H3 204 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 ZDHHC21Q8IVQ6 265 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 SKA3Q8IX90 412 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 CDK20Q8IZL9 346 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 SLC22A24Q8N4F4 322 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 CLDN22Q8N7P3 220 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 FGFBP3Q8TAT2 258 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 HTRA1Q92743 480 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 MCUR1Q96AQ8 359 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
VAPA-201ENST00000340541 STX18Q9P2W9 335 aaKnown RBP13.36□□□□□ -0.27
VAPA-201ENST00000340541 POU2F3Q9UKI9 436 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 UGT2A1Q9Y4X1 527 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 INAFM1C9JVW0 142 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 ACOT8O14734 319 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 GADD45GO95257 159 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 SLC2A10O95528 541 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 ZNF14P17017 642 aaPredicted RBP13.35□□□□□ -0.27
VAPA-201ENST00000340541 RRM2P31350 389 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 CAPZA2P47755 286 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 SMIM11AP58511 58 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 SPIBQ01892 262 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 PIGFQ07326 219 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 ZNF544Q6NX49 715 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 SLC25A47Q6Q0C1 308 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 FAM122BQ7Z309 247 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 ZER1Q7Z7L7 766 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 DHFR2Q86XF0 187 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 DEPDC4Q8N2C3 294 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 SMURF2Q9HAU4 748 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 ADAM18Q9Y3Q7 739 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 ATP23Q9Y6H3 246 aa13.35□□□□□ -0.27
VAPA-201ENST00000340541 ARFGEF3Q5TH69 2177 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 KIAA1324LA8MWY0 1029 aaPredicted RBP13.34□□□□□ -0.27
VAPA-201ENST00000340541 CRYAAP02489 173 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 CD14P08571 375 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 PATE4P0C8F1 98 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 OR8G3PP0DMU2 310 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 CD79AP11912 226 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 ACVR1BP36896 505 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 CDKN1AP38936 164 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 HMGA2P52926 109 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 ERVK-25P63136 954 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 HGFACQ04756 655 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 NPRL3Q12980 569 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 TNK1Q13470 666 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 GSG1Q2KHT4 349 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 NRN1LQ496H8 165 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 AGAP6Q5VW22 663 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 FAM205BPQ63HN1 556 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 THSD4Q6ZMP0 1018 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 ZNF584Q8IVC4 421 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 ARIH2OSQ8N7S6 290 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 SPATA3Q8NHX4 192 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 GTPBP3Q969Y2 492 aaKnown RBP13.34□□□□□ -0.27
VAPA-201ENST00000340541 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 RSRC1Q96IZ7 334 aaKnown RBP13.34□□□□□ -0.27
VAPA-201ENST00000340541 GPX7Q96SL4 187 aaPredicted RBP13.34□□□□□ -0.27
VAPA-201ENST00000340541 SH3GL3Q99963 347 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 THTPAQ9BU02 230 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 ALG12Q9BV10 488 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 FAIMQ9NVQ4 179 aa13.34□□□□□ -0.27
VAPA-201ENST00000340541 IGHV2OR16-5A0A0B4J2B6 119 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 UNC119BA6NIH7 251 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 CRLF1O75462 422 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 UBL3O95164 117 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 GIPRP48546 466 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 FABP6P51161 128 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 RAB1AP62820 205 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 MRPS34P82930 218 aaKnown RBP13.33□□□□□ -0.28
VAPA-201ENST00000340541 CLEC12BQ2HXU8 276 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 MST1LQ2TV78 715 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 MUC15Q8N387 334 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 NANOS1Q8WY41 292 aaKnown RBP13.33□□□□□ -0.28
VAPA-201ENST00000340541 NABP1Q96AH0 204 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 CCDC124Q96CT7 223 aaKnown RBP13.33□□□□□ -0.28
VAPA-201ENST00000340541 Q96M85 177 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 MDFIQ99750 246 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 DENND2DQ9H6A0 471 aaPredicted RBP13.33□□□□□ -0.28
VAPA-201ENST00000340541 MAGIXQ9H6Y5 334 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 NRIP3Q9NQ35 241 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 CBLN4Q9NTU7 201 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 LYVE1Q9Y5Y7 322 aa13.33□□□□□ -0.28
VAPA-201ENST00000340541 RTTNQ86VV8 2226 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 A6NIZ1 184 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 NDUFS7O75251 213 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 NDUFB2O95178 105 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 APOBEC3AP31941 199 aaPredicted RBP13.32□□□□□ -0.28
VAPA-201ENST00000340541 CDAP32320 146 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 RPL4P36578 427 aaKnown RBP13.32□□□□□ -0.28
VAPA-201ENST00000340541 PTDSS1P48651 473 aaKnown RBP13.32□□□□□ -0.28
VAPA-201ENST00000340541 ZNF84P51523 738 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 RAP1BP61224 184 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 RAP1AP62834 184 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 CD47Q08722 323 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms