RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 UFSP2Q9NUQ7 469 aa8.54□□□□□ -1.04
NECAP1-201ENST00000339754 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-201ENST00000339754 SHPKQ9UHJ6 478 aa8.54□□□□□ -1.04
NECAP1-201ENST00000339754 VSIG4Q9Y279 399 aa8.54□□□□□ -1.04
NECAP1-201ENST00000339754 IER3IP1Q9Y5U9 82 aa8.54□□□□□ -1.04
NECAP1-201ENST00000339754 EML5Q05BV3 1969 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TRBV6-7A0A0A0MS04 114 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 IGKV1-8A0A0C4DH67 115 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 A0A1B0GTH9 108 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 A0A1B0GV90 55 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 C9orf170A2RU37 121 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TBC1D3BA6NDS4 549 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TBC1D3FA6NER0 549 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 A6NLC8 198 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 RHPN2P1A8MT19 583 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 MCIDASD6RGH6 385 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TGM5O43548 720 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 SRPX2O60687 465 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ABLIM3O94929 683 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 SLC34A2O95436 690 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ELFN1P0C7U0 828 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 LIPCP11150 499 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 LAMP2P13473 410 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 RPS4Y1P22090 263 aaKnown RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 PSMB6P28072 239 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ADH6P28332 368 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 GRPRP30550 384 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 POU3F4P49335 361 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ACTBP60709 375 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ACTG1P63261 375 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 PLAURQ03405 335 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ALKBH1Q13686 389 aaKnown RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 KCNAB1Q14722 419 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ARHGAP19Q14CB8 494 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 DUSP5Q16690 384 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TMEM35AQ53FP2 167 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ARHGAP40Q5TG30 622 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 PRAMEF17Q5VTA0 474 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TBC1D3GQ6DHY5 549 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 DHRS11Q6UWP2 260 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 LYG2Q86SG7 212 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 SLC25A42Q86VD7 318 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 NPEPL1Q8NDH3 523 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ZNF461Q8TAF7 563 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ZPLD1Q8TCW7 415 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 MITD1Q8WV92 249 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 MS4A6EQ96DS6 147 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 SLC6A7Q99884 636 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TUBA4BQ9H853 241 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 LSM7Q9UK45 103 aaKnown RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TICRRQ7Z2Z1 1910 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 MFNGO00587 321 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 IL2RAP01589 272 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ST6GAL1P15907 406 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 AK4P27144 223 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 CFPP27918 469 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 LAP3P28838 519 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 PPP1R1AQ13522 171 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 AKIRIN2Q53H80 203 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ABHD17CQ6PCB6 329 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 SLC39A5Q6ZMH5 540 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 RHOUQ7L0Q8 258 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 NRSN1Q8IZ57 195 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 OR4E2Q8NGC2 313 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 OR10AC1Q8NH08 325 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 FOXRED1Q96CU9 486 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 SAT2Q96F10 170 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ZDHHC12Q96GR4 267 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 C14orf144Q96I85 54 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 LRFN5Q96NI6 719 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 NMNAT3Q96T66 252 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ZNF426Q9BUY5 554 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 NMNAT2Q9BZQ4 307 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 CST11Q9H112 138 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 UCK1Q9HA47 277 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 RPS10P5Q9NQ39 176 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 FBXO34Q9NWN3 711 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 ADAM18Q9Y3Q7 739 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 CSAG2Q9Y5P2 127 aa8.53□□□□□ -1.04
NECAP1-201ENST00000339754 TET1Q8NFU7 2136 aa8.52□□□□□ -1.04
NECAP1-201ENST00000339754 C2orf74A8MZ97 194 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 BLOC1S5-TXNDC5H3BN57 136 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 PEX12O00623 359 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 ERI3O43414 337 aaKnown RBP8.52□□□□□ -1.05
NECAP1-201ENST00000339754 CRHP06850 196 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 RHOP08100 348 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 ITGA5P08648 1049 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 OR8G3PP0DMU2 310 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 NID1P14543 1247 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 RAB5AP20339 215 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 CD1CP29017 333 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 SLC6A9P48067 706 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 RAB2AP61019 212 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 SNRPNP63162 240 aaKnown RBP8.52□□□□□ -1.05
NECAP1-201ENST00000339754 NKPD1Q17RQ9 610 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 HYAL4Q2M3T9 481 aa8.52□□□□□ -1.05
NECAP1-201ENST00000339754 PYY3Q5JQD4 70 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms