RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 NMNAT3Q96T66 252 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 FOXB1Q99853 325 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 SLC25A19Q9HC21 320 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 ZNF226Q9NYT6 803 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 CASQ2O14958 399 aaPredicted RBP13.49□□□□□ -0.25
SEC13-201ENST00000337354 NPR2P20594 1047 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 HOXC12P31275 282 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 CCKARP32238 428 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.49□□□□□ -0.25
SEC13-201ENST00000337354 NPRL3Q12980 569 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 RIPK1Q13546 671 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 TRIP10Q15642 601 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 TSC22D1Q15714 1073 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 C9orf135Q5VTT2 229 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 LEG1Q6P5S2 330 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 DNM1P34Q6PK57 102 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 MEX3BQ6ZN04 569 aaKnown RBP13.49□□□□□ -0.25
SEC13-201ENST00000337354 PTCHD4Q6ZW05 846 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 NPEPL1Q8NDH3 523 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 FAM222BQ8WU58 562 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 BCL2L2Q92843 193 aaPredicted RBP13.49□□□□□ -0.25
SEC13-201ENST00000337354 WFIKKN1Q96NZ8 548 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 DDOQ99489 341 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 MED18Q9BUE0 208 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 GABARAPL3Q9BY60 117 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 PRRG3Q9BZD7 231 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 SYT4Q9H2B2 425 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 MOV10Q9HCE1 1003 aaKnown RBP13.49□□□□□ -0.25
SEC13-201ENST00000337354 CMC2Q9NRP2 79 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 AMDHD2Q9Y303 409 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 HCFC1P51610 2035 aa13.49□□□□□ -0.25
SEC13-201ENST00000337354 SH3D21A4FU49 640 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 RIIAD1A6NNX1 92 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 CASKO14936 926 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 SLC16A7O60669 478 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 MITFO75030 526 aaPredicted RBP13.48□□□□□ -0.25
SEC13-201ENST00000337354 KHDRBS3O75525 346 aaKnown RBP13.48□□□□□ -0.25
SEC13-201ENST00000337354 FARS2O95363 451 aaKnown RBP13.48□□□□□ -0.25
SEC13-201ENST00000337354 EPXP11678 715 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 ZNF3P17036 446 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 MRPS34P82930 218 aaKnown RBP13.48□□□□□ -0.25
SEC13-201ENST00000337354 SLC34A1Q06495 639 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 ACSM5Q6NUN0 579 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 PACRGLQ8N7B6 248 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 LINC01560Q8TB33 94 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 SLC38A2Q96QD8 506 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 SLC29A1Q99808 456 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 NUAK2Q9H093 628 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 RNPEPL1Q9HAU8 725 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 NGBQ9NPG2 151 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 SLC17A5Q9NRA2 495 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 KCNN3Q9UGI6 736 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 FKBP7Q9Y680 259 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 MPDZO75970 2070 aa13.48□□□□□ -0.25
SEC13-201ENST00000337354 ARPC4-TTLL3A0A0A6YYG9 625 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 ZAR1LA6NP61 321 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 H7C1C5 153 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 SLC2A10O95528 541 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 WNT11O96014 354 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 OR8G3PP0DMU2 310 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 COX6B1P14854 86 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 UBE2NP61088 152 aaKnown RBP13.47□□□□□ -0.25
SEC13-201ENST00000337354 LCN6P62502 163 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 FMODQ06828 376 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 TAB1Q15750 504 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 TBRG1Q3YBR2 411 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 KLHL24Q6TFL4 600 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 ZNF813Q6ZN06 617 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 DPPA2Q7Z7J5 298 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 SLC22A24Q8N4F4 322 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 IQCF1Q8N6M8 205 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 SLC37A3Q8NCC5 494 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 SDR9C7Q8NEX9 313 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 NSMAFQ92636 917 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 RDH12Q96NR8 316 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 SIAEQ9HAT2 523 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 TMEM38BQ9NVV0 291 aa13.47□□□□□ -0.25
SEC13-201ENST00000337354 IGKV1D-43A0A0B4J1Z2 117 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 OR6C68A6NDL8 312 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 SURF4O15260 269 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 GOSR1O95249 250 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 PAICSP22234 425 aaKnown RBP13.46□□□□□ -0.25
SEC13-201ENST00000337354 CENPAP49450 140 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 SLC25A1P53007 311 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 DAZAP2Q15038 168 aaPredicted RBP13.46□□□□□ -0.25
SEC13-201ENST00000337354 PPA1Q15181 289 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 FAM27BQ5VT28 67 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 SLX4IPQ5VYV7 408 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 TMEM236Q5W0B7 351 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 FOXL2NBQ6ZUU3 175 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 ZBTB46Q86UZ6 589 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 GLB1L2Q8IW92 636 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 OR6V1Q8N148 313 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 FAM169BQ8N8A8 192 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 WDR31Q8NA23 367 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 OR2T4Q8NH00 348 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 NANOS1Q8WY41 292 aaKnown RBP13.46□□□□□ -0.25
SEC13-201ENST00000337354 PLEKHA8Q96JA3 519 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 WACQ9BTA9 647 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 RACGAP1Q9H0H5 632 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms