RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 KIR2DL1P43626 348 aaPredicted RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 SNU13P55769 128 aaKnown RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 RBMS2Q15434 407 aaKnown RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 MEX3DQ86XN8 651 aaKnown RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 OR2S2Q9NQN1 319 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 SDHAF2Q9NX18 166 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 VSX1Q9NZR4 365 aaPredicted RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 PROCRQ9UNN8 238 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 SHISA7A6NL88 538 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 CD300LBA8K4G0 201 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 RPS25P62851 125 aaKnown RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 SLC22A6Q4U2R8 563 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 DTX3Q8N9I9 347 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 TEX19Q8NA77 164 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 CPNE4Q96A23 557 aaPredicted RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 OR2A5Q96R48 311 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 OR51J1Q9H342 316 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 LIN7BQ9HAP6 207 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 RLIMQ9NVW2 624 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 RHBDD3Q9Y3P4 386 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 TRAV17A0A0B4J275 112 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 GABRR1P24046 479 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 SSPNQ14714 243 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 C12orf45Q8N5I9 185 aaPredicted RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 ZNF321PQ8N8H1 164 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 NPRL2Q8WTW4 380 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 RAB3CQ96E17 227 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 PRELID3BQ9Y3B1 194 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 SOD1P00441 154 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 IL2RAP01589 272 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 ITGB8P26012 769 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 IL2RGP31785 369 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 BTG2P78543 158 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 SMN1Q16637 294 aaKnown RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 NKPD1Q17RQ9 610 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 OR1S1Q8NH92 325 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 PFN4Q8NHR9 129 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 EIF5A2Q9GZV4 153 aaKnown RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 M0R296 226 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 SOCS6O14544 535 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 SERPINA2P20848 420 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 S100PP25815 95 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 PPIAP62937 165 aaKnown RBP10.42□□□□□ -0.74
COL4A5-201ENST00000328300 EXOSC6Q5RKV6 272 aaKnown RBP10.42□□□□□ -0.74
COL4A5-201ENST00000328300 ZNF425Q6IV72 752 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 MTFR2Q6P444 385 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 NAXDQ8IW45 347 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 SEMA6DQ8NFY4 1073 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 OR52H1Q8NGJ2 320 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 FGF20Q9NP95 211 aaPredicted RBP10.42□□□□□ -0.74
COL4A5-201ENST00000328300 SERGEFQ9UGK8 458 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 TOR1AO14656 332 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 HPGDSO60760 199 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 PAHP00439 452 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 TPOP07202 933 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 CTXN2P0C2S0 81 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 FBXO45P0C2W1 286 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 SPI1P17947 270 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 LRRC18Q8N456 261 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 OR4K15Q8NH41 348 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 AP1S3Q96PC3 154 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 ZNF649Q9BS31 505 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 PEX14O75381 377 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 CHRNB4P30926 498 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 TCTN3Q6NUS6 607 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 DCXRQ7Z4W1 244 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 PARP16Q8N5Y8 322 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 OR13C9Q8NGT0 318 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 Q96M85 177 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 OCSTAMPQ9BR26 566 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 GOSR2O14653 212 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 SSX5O60225 188 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 TFAP2AP05549 437 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 PCBP4P57723 403 aaKnown RBP10.42□□□□□ -0.74
COL4A5-201ENST00000328300 LCN6P62502 163 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 SLC35A2P78381 396 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 OR2V1Q8NHB1 315 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 ABHD5Q8WTS1 349 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 ST6GALNAC5Q9BVH7 336 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 GPR87Q9BY21 358 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 POLDIP2Q9Y2S7 368 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 KIF13BQ9NQT8 1826 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 EEF1E1-BLOC1S5C9J1V9 151 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 DVL2O14641 736 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 B4GAT1O43505 415 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 AKR7A3O95154 331 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 B3GALT4O96024 378 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 HEXAP06865 529 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 DBHP09172 617 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 GAAP10253 952 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 APEHP13798 732 aaKnown RBP10.42□□□□□ -0.74
COL4A5-201ENST00000328300 FCRLAQ7L513 359 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 MBOAT4Q96T53 435 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 PPA2Q9H2U2 334 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 NOX3Q9HBY0 568 aa10.42□□□□□ -0.74
COL4A5-201ENST00000328300 IGHV3-20A0A0C4DH32 117 aa10.41□□□□□ -0.74
COL4A5-201ENST00000328300 MOSPD3O75425 235 aa10.41□□□□□ -0.74
COL4A5-201ENST00000328300 CAPNS1P04632 268 aa10.41□□□□□ -0.74
COL4A5-201ENST00000328300 BMP1P13497 986 aa10.41□□□□□ -0.74
COL4A5-201ENST00000328300 ZNF93P35789 620 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms