RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 DAG1Q14118 895 aa25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 SLC16A14Q7RTX9 510 aa25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 MEX3DQ86XN8 651 aaKnown RBP25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 OR4K5Q8NGD3 323 aa25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 OR13C2Q8NGS9 318 aa25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 COX4I2Q96KJ9 171 aa25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 ZNF442Q9H7R0 627 aa25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 GDF2Q9UK05 429 aaPredicted RBP25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 ZNF346Q9UL40 294 aaKnown RBP25.3■■□□□ 1.64
SYNGR1-202ENST00000318801 NIPBLQ6KC79 2804 aaeCLIP25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 SMAD7O15105 426 aaKnown RBP25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 SSX4O60224 188 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 IGHMP01871 453 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 FUT4P22083 530 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 DSCR9P59020 149 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 PLP2Q04941 152 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 C10orf128Q5T292 105 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 TSEN54Q7Z6J9 526 aaKnown RBP25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 FAM86B1Q8N7N1 296 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 SH3GL3Q99963 347 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 C1orf198Q9H425 327 aa25.29■■□□□ 1.64
SYNGR1-202ENST00000318801 XKRYO14609 159 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 GADD45GO95257 159 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 SERPINA5P05154 406 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 FABP3P05413 133 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 ZNF14P17017 642 aaPredicted RBP25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 ZNF133P52736 654 aaPredicted RBP25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 CLEC9AQ6UXN8 241 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 OR52J3Q8NH60 311 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 POP5Q969H6 163 aaKnown RBP25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 FAM46AQ96IP4 442 aaKnown RBP25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 KCNK17Q96T54 332 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 RHNO1Q9BSD3 238 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 LRMDAQ9H2I8 198 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 SEC61A2Q9H9S3 476 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 SIAEQ9HAT2 523 aa25.28■■□□□ 1.64
SYNGR1-202ENST00000318801 DIRAS1O95057 198 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 IFNGR2P38484 337 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 HGFACQ04756 655 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 TNK1Q13470 666 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 ADIPOQQ15848 244 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 SWI5Q1ZZU3 235 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 MTX3Q5HYI7 312 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 IGFN1Q86VF2 1251 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 ARIH2OSQ8N7S6 290 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 HDAC2Q92769 488 aaKnown RBP25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 MUC13Q9H3R2 512 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 NOX3Q9HBY0 568 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 ZNF224Q9NZL3 707 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 ACTR3BQ9P1U1 418 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 TMCC3Q9ULS5 477 aa25.27■■□□□ 1.64
SYNGR1-202ENST00000318801 NDUFS7O75251 213 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 STAMBPO95630 424 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 ERCC1P07992 297 aaPredicted RBP25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 CD14P08571 375 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 NR4A1P22736 598 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 MRPS34P82930 218 aaKnown RBP25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 SPIBQ01892 262 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 SNTB2Q13425 540 aaKnown RBP25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 RAB39AQ14964 217 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 EFNB3Q15768 340 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 CLEC2AQ6UVW9 174 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 MYPOPQ86VE0 399 aaPredicted RBP25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 OR1J2Q8NGS2 313 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 NSMAFQ92636 917 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 MS4A3Q96HJ5 214 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 GSX1Q9H4S2 264 aaPredicted RBP25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 CCNB1IP1Q9NPC3 277 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 IL1RAPQ9NPH3 570 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 CMAHPQ9Y471 501 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 FKBP7Q9Y680 259 aa25.26■■□□□ 1.63
SYNGR1-202ENST00000318801 IQCMA0A1B0GVH7 501 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 CDC42EP2O14613 210 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 AHCYL1O43865 530 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 NDUFB2O95178 105 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 SLC2A10O95528 541 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 THBS4P35443 961 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 EFNA4P52798 201 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 RPS23P62266 143 aaKnown RBP25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 SGCAQ16586 387 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 KRT80Q6KB66 452 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 CIARTQ8N365 385 aaPredicted RBP25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 LRRC18Q8N456 261 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 LRRC75AQ8NAA5 344 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 DHRS1Q96LJ7 313 aa25.25■■□□□ 1.63
SYNGR1-202ENST00000318801 TRBV4-1A0A0J9YWV2 114 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 PATE4P0C8F1 98 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 ERVK-25P63136 954 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 MST1LQ2TV78 715 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 ZNF75AQ96N20 296 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 TSPAN32Q96QS1 320 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 VRK1Q99986 396 aaPredicted RBP25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 PLK3Q9H4B4 646 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 FAM53CQ9NYF3 392 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 PRPF19Q9UMS4 504 aaKnown RBP25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 ARFGEF3Q5TH69 2177 aa25.24■■□□□ 1.63
SYNGR1-202ENST00000318801 SLC22A23A1A5C7 686 aa25.23■■□□□ 1.63
SYNGR1-202ENST00000318801 KRT36O76013 467 aa25.23■■□□□ 1.63
SYNGR1-202ENST00000318801 SEMG1P04279 462 aa25.23■■□□□ 1.63
SYNGR1-202ENST00000318801 ZNF35P13682 527 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms