RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 UBQLN4Q9NRR5 601 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 RXFP3Q9NSD7 469 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SPATA2Q9UM82 520 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 MED19A0JLT2 244 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 C4orf47A7E2U8 309 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 EFCAB7A8K855 629 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 KDM4EB2RXH2 506 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 TO15178 435 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF354AO60765 605 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 RLN2P04090 185 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 S100A9P06702 114 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 TFPIP10646 304 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 FGF5P12034 268 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 GABRA1P14867 456 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF3P17036 446 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 RAB3BP20337 219 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ADH7P40394 386 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 STARP49675 285 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 DCDP81605 110 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 FABP5Q01469 135 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 FAM69BQ5VUD6 431 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 PAQR6Q6TCH4 344 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 C16orf47Q6ZP98 133 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ASB18Q6ZVZ8 466 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 OVCH1Q7RTY7 1134 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 PPP1R3BQ86XI6 285 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SYT14Q8NB59 555 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 APCDD1LQ8NCL9 501 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 BRIX1Q8TDN6 353 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 OSTF1Q92882 214 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 C3orf49Q96BT1 292 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 KCTD12Q96CX2 325 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 HS6ST2Q96MM7 605 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 CACNG6Q9BXT2 260 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SLC25A32Q9H2D1 315 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 UBQLN3Q9H347 655 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 CDCP1Q9H5V8 836 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 EXTL2Q9UBQ6 330 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SIGLEC7Q9Y286 467 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 MED31Q9Y3C7 131 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 MPDZO75970 2070 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 IRGMA1A4Y4 181 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 BHLHE40O14503 412 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 SSNA1O43805 119 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 NDUFS6O75380 124 aaKnown RBP11.82□□□□□ -0.52
CPNE1-201ENST00000317677 AQP8O94778 261 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-201ENST00000317677 CCL4P13236 92 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 PPP3CBP16298 524 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 POU3F2P20265 443 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-201ENST00000317677 S100A11P31949 105 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 PITPNBP48739 271 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 VEGFCP49767 419 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 SELENOPP49908 381 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 CAV3P56539 151 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 RAP2BP61225 183 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 ZSWIM7Q19AV6 140 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 CCDC157Q569K6 752 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 AADACL4Q5VUY2 407 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 OAFQ86UD1 273 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 ARIH2OSQ8N7S6 290 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 BBS1Q8NFJ9 593 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 OR52I1Q8NGK6 324 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 ORAI1Q96D31 301 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 MS4A3Q96HJ5 214 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 ART5Q96L15 291 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 RBM14Q96PK6 669 aaKnown RBP11.82□□□□□ -0.52
CPNE1-201ENST00000317677 MNTQ99583 582 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 SLC35A3Q9Y2D2 325 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 WDFY3Q8IZQ1 3526 aa11.82□□□□□ -0.52
CPNE1-201ENST00000317677 IGKV1D-42A0A075B6H8 117 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 TRAV27A0A087WT01 109 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 LRRN3E7EW58 273 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 ALOX12BO75342 701 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 REM1O75628 298 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 RP2O75695 350 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 SC5DO75845 299 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 OR2A4O95047 310 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 SELLP14151 372 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 ABCD3P28288 659 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 RBM34P42696 430 aaKnown RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 DUSP3P51452 185 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 DCAF7P61962 342 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 DEFA5Q01523 94 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 PYHIN1Q6K0P9 492 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 ULK3Q6PHR2 472 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 PHOSPHO1Q8TCT1 267 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 ELMOD3Q96FG2 381 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 OR2A7Q96R45 310 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 DDOQ99489 341 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 FGF20Q9NP95 211 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 HINT3Q9NQE9 182 aaKnown RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 PIPOXQ9P0Z9 390 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 MYEF2Q9P2K5 600 aaKnown RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 ICAM5Q9UMF0 924 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 A0A087WUJ7 227 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms