RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MDH1P40925 334 aaKnown RBP15.29■□□□□ 0.04
TPM1-203ENST00000317516 RUNX1T1Q06455 604 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 LAPTM4AQ15012 233 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 FXNQ16595 210 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 UGT2A3Q6UWM9 527 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 CXXC5Q7LFL8 322 aaKnown RBP15.29■□□□□ 0.04
TPM1-203ENST00000317516 SLC15A3Q8IY34 581 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 POU5F2Q8N7G0 328 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 FGFBP3Q8TAT2 258 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 BPIFA2Q96DR5 249 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 SEPHS2Q99611 448 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 FNDC11Q9BVV2 318 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 SIAEQ9HAT2 523 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 CDH20Q9HBT6 801 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 DUSP13Q9UII6 198 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 ZNF346Q9UL40 294 aaKnown RBP15.29■□□□□ 0.04
TPM1-203ENST00000317516 ATRQ13535 2644 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 TSPAN19P0C672 248 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 COX4I1P13073 169 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 IFI30P13284 250 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 GUCA1AP43080 201 aaPredicted RBP15.28■□□□□ 0.04
TPM1-203ENST00000317516 RAD52P43351 418 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 CHN2P52757 468 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 MYBPC1Q00872 1141 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 LIPEQ05469 1076 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 TBC1D28Q2M2D7 210 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 ALG10Q5BKT4 473 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 ARMC4Q5T2S8 1044 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 RGS7BPQ6MZT1 257 aaPredicted RBP15.28■□□□□ 0.04
TPM1-203ENST00000317516 ZNF584Q8IVC4 421 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 RBM15BQ8NDT2 890 aaKnown RBP15.28■□□□□ 0.04
TPM1-203ENST00000317516 MOSPD2Q8NHP6 518 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 SPATA3Q8NHX4 192 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 FNDC8Q8TC99 324 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 MSI2Q96DH6 328 aaKnown RBP15.28■□□□□ 0.04
TPM1-203ENST00000317516 RBP7Q96R05 134 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 SYT3Q9BQG1 590 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 TXNIPQ9H3M7 391 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 TPK1Q9H3S4 243 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 SMURF2Q9HAU4 748 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 CMTM6Q9NX76 183 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 A4GNTQ9UNA3 340 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 HIF3AQ9Y2N7 669 aa15.28■□□□□ 0.04
TPM1-203ENST00000317516 CHD3Q12873 2000 aaKnown RBP15.27■□□□□ 0.04
TPM1-203ENST00000317516 A0A1W2PPW3 197 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 TGFAP01135 160 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 HNF1AP20823 631 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 ZNF133P52736 654 aaPredicted RBP15.27■□□□□ 0.04
TPM1-203ENST00000317516 MRPS34P82930 218 aaKnown RBP15.27■□□□□ 0.04
TPM1-203ENST00000317516 HSF2Q03933 536 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 TRAM2Q15035 370 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 ANKDD1AQ495B1 522 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 C10orf128Q5T292 105 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 FKBP9P1Q75LS8 142 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 RNF113BQ8IZP6 322 aaKnown RBP15.27■□□□□ 0.04
TPM1-203ENST00000317516 LRRC18Q8N456 261 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 GEMIN6Q8WXD5 167 aaKnown RBP15.27■□□□□ 0.04
TPM1-203ENST00000317516 C11orf40Q8WZ69 217 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 HPS1Q92902 700 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 CCNB1IP1Q9NPC3 277 aa15.27■□□□□ 0.04
TPM1-203ENST00000317516 CXCR6O00574 342 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 SNAP29O95721 258 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 ZNF682O95780 498 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 IGFBP1P08833 259 aaPredicted RBP15.26■□□□□ 0.03
TPM1-203ENST00000317516 TACSTD2P09758 323 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 SAGP10523 405 aaPredicted RBP15.26■□□□□ 0.03
TPM1-203ENST00000317516 APLNRP35414 380 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 ALDH3B1P43353 468 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 CD47Q08722 323 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 MOGQ16653 247 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 MSMPQ1L6U9 139 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 IFI44LQ53G44 452 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 THEM4Q5T1C6 240 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 FAM205BPQ63HN1 556 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 UNQ6126/PRO20091Q6UXV3 157 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 RRM2BQ7LG56 351 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 OFCC1Q8IZS5 231 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 ALG12Q9BV10 488 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 BCL2L14Q9BZR8 327 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 CHODLQ9H9P2 273 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 SLCO1C1Q9NYB5 712 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 FZR1Q9UM11 496 aa15.26■□□□□ 0.03
TPM1-203ENST00000317516 LCKP06239 509 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 FAM157BP0CG42 384 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 TCN1P20061 433 aaPredicted RBP15.25■□□□□ 0.03
TPM1-203ENST00000317516 YAP1P46937 504 aaKnown RBP15.25■□□□□ 0.03
TPM1-203ENST00000317516 SLC7A2P52569 658 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 SEC24CP53992 1094 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 UCP2P55851 309 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 CTXN1P60606 82 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 RPL27P61353 136 aaKnown RBP15.25■□□□□ 0.03
TPM1-203ENST00000317516 RIN1Q13671 783 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 SGCAQ16586 387 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 NKPD1Q17RQ9 610 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 HACD2Q6Y1H2 254 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 CBLL1Q75N03 491 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 VTCN1Q7Z7D3 282 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 OAFQ86UD1 273 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 LRP11Q86VZ4 500 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 CYP4Z1Q86W10 505 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms