RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TRMT10AQ8TBZ6 339 aaKnown RBP11.19□□□□□ -0.62
RNF4-201ENST00000314289 PPP1R14AQ96A00 147 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 CREB3L1Q96BA8 519 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 DERL3Q96Q80 235 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 KCNJ15Q99712 375 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 DPCDQ9BVM2 203 aaPredicted RBP11.19□□□□□ -0.62
RNF4-201ENST00000314289 METTL7AQ9H8H3 244 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 MED29Q9NX70 200 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 MYOTQ9UBF9 498 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 ADAM30Q9UKF2 790 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 CPAMD8Q8IZJ3 1885 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 A8MVM7 634 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 SHOXO15266 292 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 AHSA1O95433 338 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 RENP00797 406 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 ATF1P18846 271 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 RAB3BP20337 219 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 HOXA6P31267 233 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 FMODQ06828 376 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 TEX261Q6UWH6 196 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 LRRN1Q6UXK5 716 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 PXKQ7Z7A4 578 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 IZUMO1Q8IYV9 350 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 SLC43A2Q8N370 569 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 OR10AC1Q8NH08 325 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 RGP1Q92546 391 aaPredicted RBP11.19□□□□□ -0.62
RNF4-201ENST00000314289 RNF166Q96A37 237 aaPredicted RBP11.19□□□□□ -0.62
RNF4-201ENST00000314289 PTRH2Q9Y3E5 179 aaKnown RBP11.19□□□□□ -0.62
RNF4-201ENST00000314289 U3KQ87 197 aa11.19□□□□□ -0.62
RNF4-201ENST00000314289 PHF3Q92576 2039 aaKnown RBP11.19□□□□□ -0.62
RNF4-201ENST00000314289 VSTM2BA6NLU5 285 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 PIN1P1O15428 100 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 OGG1O15527 345 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 CTLA4P16410 223 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 M6PRP20645 277 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 ANGPT1Q15389 498 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 SLC35D3Q5M8T2 416 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 METAP1DQ6UB28 335 aaPredicted RBP11.18□□□□□ -0.62
RNF4-201ENST00000314289 SYS1Q8N2H4 156 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 OR11H7Q8NGC8 314 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 OR11H4Q8NGC9 324 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 OR51A4Q8NGJ6 313 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 OR2T4Q8NH00 348 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 EMC6Q9BV81 110 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 ZNF224Q9NZL3 707 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 FBXL2Q9UKC9 423 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 CDK2AP1O14519 115 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 EFNA2O43921 213 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 NPIPB7O75200 414 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 WNT11O96014 354 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 CCKBRP32239 447 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 INSM1Q01101 510 aaPredicted RBP11.18□□□□□ -0.62
RNF4-201ENST00000314289 SIGLEC14Q08ET2 396 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 SQSTM1Q13501 440 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 HES5Q5TA89 166 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 RPL22L1Q6P5R6 122 aaKnown RBP11.18□□□□□ -0.62
RNF4-201ENST00000314289 SLC16A9Q7RTY1 509 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 CDH24Q86UP0 819 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 MS4A15Q8N5U1 240 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 RFT1Q96AA3 541 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 THAP7Q9BT49 309 aaPredicted RBP11.18□□□□□ -0.62
RNF4-201ENST00000314289 DEFB126Q9BYW3 111 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 BEX1Q9HBH7 125 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 BRD7Q9NPI1 651 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 PPP4R1LQ9P1A2 415 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 EXPH5Q8NEV8 1989 aa11.18□□□□□ -0.62
RNF4-201ENST00000314289 SPARCP09486 303 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 CXCL3P19876 107 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 STOMP27105 288 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 TALDO1P37837 337 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 RPS18P62269 152 aaKnown RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 C17orf67Q0P5P2 114 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 SGCBQ16585 318 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 TRILQ7L0X0 811 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 DNAAF1Q8NEP3 725 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 BEST4Q8NFU0 473 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 LRFN5Q96NI6 719 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 ANKRD10Q9NXR5 420 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 FRRS1LQ9P0K9 344 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 EIF3KQ9UBQ5 218 aaKnown RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 RPH3AQ9Y2J0 694 aaPredicted RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 ZNF593O00488 134 aaPredicted RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 PLPP3O14495 311 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 DHFRP00374 187 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 SLC6A1P30531 599 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 ZNF81P51508 661 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 RPL27P61353 136 aaKnown RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 NTRK2Q16620 822 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 ISXQ2M1V0 245 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 MRPL14Q6P1L8 145 aaKnown RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 COMMD7Q86VX2 200 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 GCDHQ92947 438 aaPredicted RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 HGDQ93099 445 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 ZFP3Q96NJ6 502 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 CCNL2Q96S94 520 aaPredicted RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 ZFP64Q9NPA5 681 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 SLCO1C1Q9NYB5 712 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 ELF5Q9UKW6 265 aaPredicted RBP11.17□□□□□ -0.62
RNF4-201ENST00000314289 CFAP47Q6ZTR5 3102 aa11.17□□□□□ -0.62
RNF4-201ENST00000314289 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms