RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 TTRP02766 147 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 SRFP11831 508 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 RPL24P83731 157 aaKnown RBP14.09□□□□□ -0.15
LEMD3-201ENST00000308330 ACSM1Q08AH1 577 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 RAB31Q13636 194 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 PMS2P11Q13670 270 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 HSF5Q4G112 596 aaPredicted RBP14.09□□□□□ -0.15
LEMD3-201ENST00000308330 OR4N5Q8IXE1 308 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 FAM213BQ8TBF2 198 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 GRHL3Q8TE85 626 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 ZFYVE21Q9BQ24 234 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 AK6Q9Y3D8 172 aaKnown RBP14.09□□□□□ -0.15
LEMD3-201ENST00000308330 LSM5Q9Y4Y9 91 aaKnown RBP14.09□□□□□ -0.15
LEMD3-201ENST00000308330 ENTPD2Q9Y5L3 495 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 DDX60LQ5H9U9 1706 aaKnown RBP14.09□□□□□ -0.15
LEMD3-201ENST00000308330 DNASE2O00115 360 aaPredicted RBP14.09□□□□□ -0.15
LEMD3-201ENST00000308330 DSCR3O14972 297 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 SIGLEC5O15389 551 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 PDYNP01213 254 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 HEXAP06865 529 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 SIGLEC14Q08ET2 396 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 OR4D1Q15615 310 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 GNPDA2Q8TDQ7 276 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 MENTQ9BUN1 341 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 TMEM265A0A087WTH1 108 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 TRAV34A0A0B4J273 112 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 LIPCP11150 499 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 SELLP14151 372 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 IMPA1P29218 277 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 CDX1P47902 265 aaPredicted RBP14.09□□□□□ -0.15
LEMD3-201ENST00000308330 SLC26A5P58743 744 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 OTUD1Q5VV17 481 aaPredicted RBP14.09□□□□□ -0.15
LEMD3-201ENST00000308330 ISCA2Q86U28 154 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 L3MBTL4Q8NA19 623 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 MED17Q9NVC6 651 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 PRODH2Q9UF12 536 aa14.09□□□□□ -0.15
LEMD3-201ENST00000308330 SEC16AO15027 2179 aa14.08□□□□□ -0.15
LEMD3-201ENST00000308330 LINC00614P0C842 121 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 PGFP49763 221 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 GSK3AP49840 483 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 ERVFRD-1P60508 538 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 RAB40BQ12829 278 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 Q6ZRG5 221 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 UBE3DQ7Z6J8 389 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 KLHDC8AQ8IYD2 350 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 RASGEF1AQ8N9B8 481 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 CMKLR1Q99788 373 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 USP22Q9UPT9 525 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 F3P13726 295 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 MMP11P24347 488 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 NUTF2P61970 127 aaKnown RBP14.08□□□□□ -0.16
LEMD3-201ENST00000308330 OR2G6Q5TZ20 316 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 GPER1Q99527 375 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 CFHR5Q9BXR6 569 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 TAF9BQ9HBM6 251 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 MYO5AQ9Y4I1 1855 aaKnown RBP14.08□□□□□ -0.16
LEMD3-201ENST00000308330 GAAP10253 952 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 TIA1P31483 386 aaKnown RBP eCLIP14.08□□□□□ -0.16
LEMD3-201ENST00000308330 GALNSP34059 522 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 TAS2R31P59538 309 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 PMPCAQ10713 525 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 ST3GAL2Q16842 350 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 EXOSC6Q5RKV6 272 aaKnown RBP14.08□□□□□ -0.16
LEMD3-201ENST00000308330 FUBP1Q96AE4 644 aaKnown RBP14.08□□□□□ -0.16
LEMD3-201ENST00000308330 C16orf58Q96GQ5 468 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 MS4A10Q96PG2 267 aa14.08□□□□□ -0.16
LEMD3-201ENST00000308330 YBX2Q9Y2T7 364 aaKnown RBP14.08□□□□□ -0.16
LEMD3-201ENST00000308330 A0A1B0GVT2 93 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 PMS2P2O95744 297 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 ADPRHP54922 357 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 YPEL5P62699 121 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 C2orf76Q3KRA6 126 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 CD200R1Q8TD46 325 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 CLCC1Q96S66 551 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 SGPP1Q9BX95 441 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 ARID1BQ8NFD5 2236 aaPredicted RBP14.07□□□□□ -0.16
LEMD3-201ENST00000308330 A0A0U1RQK1 487 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 TP53I11O14683 189 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 OPN1LWP04000 364 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 ARG1P05089 322 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 ABOP16442 354 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 NFYBP25208 207 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 ADIRFQ15847 76 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 NKPD1Q17RQ9 610 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 ARSJQ5FYB0 599 aaPredicted RBP14.07□□□□□ -0.16
LEMD3-201ENST00000308330 C1orf53Q5VUE5 145 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 TMEM108Q6UXF1 575 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 RFLNAQ6ZTI6 216 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 ZNF100Q8IYN0 542 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 FGF14Q92915 247 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 WDR89Q96FK6 387 aaPredicted RBP14.07□□□□□ -0.16
LEMD3-201ENST00000308330 CBLN4Q9NTU7 201 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 CLEC4EQ9ULY5 219 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 FLVCR2Q9UPI3 526 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 OR5H14A6NHG9 310 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 ZNF593O00488 134 aaPredicted RBP14.07□□□□□ -0.16
LEMD3-201ENST00000308330 PCMT1P22061 227 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 CCKARP32238 428 aa14.07□□□□□ -0.16
LEMD3-201ENST00000308330 EIF2B1Q14232 305 aaKnown RBP14.07□□□□□ -0.16
LEMD3-201ENST00000308330 OR6K6Q8NGW6 343 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms