RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 Q8N402 240 aa17.42■□□□□ 0.38
HOXC4-201ENST00000303406 RNF128Q8TEB7 428 aa17.42■□□□□ 0.38
HOXC4-201ENST00000303406 C4orf45Q96LM5 186 aa17.42■□□□□ 0.38
HOXC4-201ENST00000303406 FAM117AQ9C073 453 aa17.42■□□□□ 0.38
HOXC4-201ENST00000303406 CDCP1Q9H5V8 836 aa17.42■□□□□ 0.38
HOXC4-201ENST00000303406 ZNF160Q9HCG1 818 aa17.42■□□□□ 0.38
HOXC4-201ENST00000303406 SLCO1C1Q9NYB5 712 aa17.42■□□□□ 0.38
HOXC4-201ENST00000303406 NPAP1Q9NZP6 1156 aa17.42■□□□□ 0.38
HOXC4-201ENST00000303406 H3BML4 177 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 PSMD9O00233 223 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 RPP14O95059 124 aaKnown RBP17.41■□□□□ 0.38
HOXC4-201ENST00000303406 NR4A2P43354 598 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 POU3F1Q03052 451 aaPredicted RBP17.41■□□□□ 0.38
HOXC4-201ENST00000303406 HACD4Q5VWC8 232 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 SAMD12Q8N8I0 201 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 TMEM41AQ96HV5 264 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 SGCZQ96LD1 299 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 SLITRK2Q9H156 845 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 KLHL9Q9P2J3 617 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 B3GAT1Q9P2W7 334 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 SPATA2Q9UM82 520 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 LAMA1P25391 3075 aa17.41■□□□□ 0.38
HOXC4-201ENST00000303406 TRBV5-7A0A0A0MS05 114 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 SHISA8B8ZZ34 492 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 AQP8O94778 261 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 PSKH1P11801 424 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 ATF1P18846 271 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 P2RY4P51582 365 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 DSCR4P56555 118 aaPredicted RBP17.4■□□□□ 0.38
HOXC4-201ENST00000303406 ADAM8P78325 824 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 EIF3IQ13347 325 aaKnown RBP17.4■□□□□ 0.38
HOXC4-201ENST00000303406 P2RY14Q15391 338 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 SLC22A10Q63ZE4 541 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 PYHIN1Q6K0P9 492 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 H3F3CQ6NXT2 135 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 NRARPQ7Z6K4 114 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 C19orf18Q8NEA5 215 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 SLC26A10Q8NG04 563 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 CT55Q8WUE5 264 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 ADAMTS14Q8WXS8 1223 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 HSD17B8Q92506 261 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 ZC3HAV1LQ96H79 300 aaKnown RBP17.4■□□□□ 0.38
HOXC4-201ENST00000303406 CDC6Q99741 560 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 ELOVL3Q9HB03 270 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 SACM1LQ9NTJ5 587 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 FARSAQ9Y285 508 aaKnown RBP17.4■□□□□ 0.38
HOXC4-201ENST00000303406 COA3Q9Y2R0 106 aaPredicted RBP17.4■□□□□ 0.38
HOXC4-201ENST00000303406 ZDBF2Q9HCK1 2354 aa17.4■□□□□ 0.38
HOXC4-201ENST00000303406 GPR171O14626 319 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 CDX4O14627 284 aaPredicted RBP17.39■□□□□ 0.37
HOXC4-201ENST00000303406 GPANK1O95872 356 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 EIF4EP06730 217 aaKnown RBP17.39■□□□□ 0.37
HOXC4-201ENST00000303406 SPARCP09486 303 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 LIFP15018 202 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 ZNF17P17021 662 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 GPR85P60893 370 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 SLC35A1P78382 337 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 INPP5JQ15735 1006 aaPredicted RBP17.39■□□□□ 0.37
HOXC4-201ENST00000303406 MEP1BQ16820 701 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 PRAMEF20Q5VT98 475 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 DEGS2Q6QHC5 323 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 UEVLDQ8IX04 471 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 KDM8Q8N371 416 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 TMEM156Q8N614 296 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 IL17RDQ8NFM7 739 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 OR4M1Q8NGD0 313 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 OR52N5Q8NH56 324 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 GPR148Q8TDV2 347 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 MIB2Q96AX9 1013 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 AMELYQ99218 206 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 MRPL13Q9BYD1 178 aaKnown RBP17.39■□□□□ 0.37
HOXC4-201ENST00000303406 PROK2Q9HC23 129 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 HPF1Q9NWY4 346 aa17.39■□□□□ 0.37
HOXC4-201ENST00000303406 AIPO00170 330 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 PMS2P2O95744 297 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 JMJD7P0C870 316 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 CCL3P10147 92 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 ZNF823P16415 610 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 PITPNBP48739 271 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 RIDAP52758 137 aaKnown RBP17.38■□□□□ 0.37
HOXC4-201ENST00000303406 OR2B6P58173 313 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 ETFDHQ16134 617 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 TIPARPQ7Z3E1 657 aaKnown RBP17.38■□□□□ 0.37
HOXC4-201ENST00000303406 ZNF676Q8N7Q3 588 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 OXGR1Q96P68 337 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 RBP7Q96R05 134 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 B3GAT2Q9NPZ5 323 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 AK6Q9Y3D8 172 aaKnown RBP17.38■□□□□ 0.37
HOXC4-201ENST00000303406 RALGAPA1Q6GYQ0 2036 aa17.38■□□□□ 0.37
HOXC4-201ENST00000303406 CCDC187A0A096LP49 1063 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 A0A1W2PPK0 400 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 ACOD1A6NK06 481 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 BOLA2-SMG1P6H3BVE0 249 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 PLA2G10O15496 165 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 ZNF806P0C7X5 589 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 TCN2P20062 427 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 KIR3DL2P43630 455 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 EIF2B1Q14232 305 aaKnown RBP17.37■□□□□ 0.37
HOXC4-201ENST00000303406 SF3A2Q15428 464 aaKnown RBP17.37■□□□□ 0.37
HOXC4-201ENST00000303406 TAB1Q15750 504 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms