RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 H3BN98 237 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 BAG2O95816 211 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 OSMP13725 252 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 LOXP28300 417 aaPredicted RBP11.15□□□□□ -0.62
SS18-202ENST00000269138 NOS3P29474 1203 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 ZNF362Q5T0B9 420 aaPredicted RBP11.15□□□□□ -0.62
SS18-202ENST00000269138 THEM4Q5T1C6 240 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 ZNF627Q7L945 461 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 SVOPLQ8N434 492 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 OR52E2Q8NGJ4 325 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 FGFBP3Q8TAT2 258 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 FOXN4Q96NZ1 517 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 TSSK2Q96PF2 358 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 NMNAT3Q96T66 252 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 GABARAPL1Q9H0R8 117 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 SYT4Q9H2B2 425 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 PAPOLBQ9NRJ5 636 aaKnown RBP11.15□□□□□ -0.62
SS18-202ENST00000269138 VSX1Q9NZR4 365 aaPredicted RBP11.15□□□□□ -0.62
SS18-202ENST00000269138 CELSR2Q9HCU4 2923 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 CENPEQ02224 2701 aa11.15□□□□□ -0.62
SS18-202ENST00000269138 FAM221AA4D161 298 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 DCTN6O00399 190 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 IDH3BO43837 385 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 CTAG2O75638 210 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 HLA-HP01893 362 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 HRGP04196 525 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 SCG5P05408 212 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 PATE4P0C8F1 98 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 CTLA4P16410 223 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 ZNF83P51522 516 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 ZNF84P51523 738 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 KRTAP10-9P60411 292 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.14□□□□□ -0.63
SS18-202ENST00000269138 GINS1Q14691 196 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 ACSM5Q6NUN0 579 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 LEG1Q6P5S2 330 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 ADCK1Q86TW2 530 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 JAZF1Q86VZ6 243 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 SKA3Q8IX90 412 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 PQLC1Q8N2U9 271 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 LNX2Q8N448 690 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 SLC22A24Q8N4F4 322 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 CYB561A3Q8NBI2 242 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 NPEPL1Q8NDH3 523 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 SDR9C7Q8NEX9 313 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 TEX47Q8TBZ9 253 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 STMN2Q93045 179 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 C14orf79Q96F83 325 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 PIK3IP1Q96FE7 263 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 PLPPR2Q96GM1 343 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 SH3GL3Q99963 347 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 NUAK2Q9H093 628 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 FN3KQ9H479 309 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 RERGLQ9H628 205 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 NOX3Q9HBY0 568 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 ZNF224Q9NZL3 707 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 TMEFF2Q9UIK5 374 aaPredicted RBP11.14□□□□□ -0.63
SS18-202ENST00000269138 AMDHD2Q9Y303 409 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 ARPC4-TTLL3A0A0A6YYG9 625 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.14□□□□□ -0.63
SS18-202ENST00000269138 A0A1W2PPR1 153 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 DPRXA6NFQ7 191 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 AHCYL1O43865 530 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 SLC16A7O60669 478 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 HOXB1P14653 301 aaPredicted RBP11.14□□□□□ -0.63
SS18-202ENST00000269138 HOXC12P31275 282 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 CAPZA2P47755 286 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 GIPRP48546 466 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 UBE2NP61088 152 aaKnown RBP11.14□□□□□ -0.63
SS18-202ENST00000269138 PIGFQ07326 219 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 SGCAQ16586 387 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 PGGHGQ32M88 737 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 TMEM236Q5W0B7 351 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 OTPQ5XKR4 325 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 OR2T33Q8NG76 320 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 FNDC8Q8TC99 324 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 NABP1Q96AH0 204 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 DDOQ99489 341 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 CIB1Q99828 191 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 SRA1Q9HD15 236 aaKnown RBP11.14□□□□□ -0.63
SS18-202ENST00000269138 RASSF1Q9NS23 344 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 KRT84Q9NSB2 600 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 UNC79Q9P2D8 2635 aa11.14□□□□□ -0.63
SS18-202ENST00000269138 DCHS2Q6V1P9 2916 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 A0A1W2PPL8 197 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 CYSRT1A8MQ03 144 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 FAM171A2A8MVW0 826 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 M0R1B8 84 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 GPANK1O95872 356 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 WNT11O96014 354 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 PLAUP00749 431 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 OR8G3PP0DMU2 310 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 CD79AP11912 226 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 NR2C1P13056 603 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 EPHA2P29317 976 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 SSTR2P30874 369 aa11.13□□□□□ -0.63
SS18-202ENST00000269138 CRISP1P54107 249 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms