RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CYBRD1Q53TN4 286 aa16.31■□□□□ 0.2
TM6SF1-201ENST00000258909 TMEM53Q6P2H8 277 aa16.31■□□□□ 0.2
TM6SF1-201ENST00000258909 NOXO1Q8NFA2 376 aa16.31■□□□□ 0.2
TM6SF1-201ENST00000258909 TPD52L3Q96J77 140 aa16.31■□□□□ 0.2
TM6SF1-201ENST00000258909 MRPL13Q9BYD1 178 aaKnown RBP16.31■□□□□ 0.2
TM6SF1-201ENST00000258909 NARFLQ9H6Q4 476 aa16.31■□□□□ 0.2
TM6SF1-201ENST00000258909 INIPQ9NRY2 104 aa16.31■□□□□ 0.2
TM6SF1-201ENST00000258909 PIP5K1CO60331 668 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 TRMUO75648 421 aaKnown RBP16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 SLC2A10O95528 541 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 ACADSP16219 412 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 HNF1AP20823 631 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 RBM34P42696 430 aaKnown RBP16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 ZNF84P51523 738 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 SLC36A2Q495M3 483 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 COQ5Q5HYK3 327 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 ERICH5Q6P6B1 374 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 LINC01356Q8N9X3 169 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 TSPAN32Q96QS1 320 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 CDH20Q9HBT6 801 aa16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 GMPR2Q9P2T1 348 aaKnown RBP16.3■□□□□ 0.2
TM6SF1-201ENST00000258909 BBIP1A8MTZ0 92 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 NCR1O76036 304 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 LCKP06239 509 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 VIMP08670 466 aaKnown RBP16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 FUT4P22083 530 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 CDAP32320 146 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 RGS7BPQ6MZT1 257 aaPredicted RBP16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 MEX3DQ86XN8 651 aaKnown RBP16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 ICA1LQ8NDH6 482 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 RBM15BQ8NDT2 890 aaKnown RBP16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 HPS1Q92902 700 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 YIPF5Q969M3 257 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 TAAR3PQ9P1P4 343 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 MED31Q9Y3C7 131 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 WNT9BO14905 357 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 ENTPD5O75356 428 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 NPPAP01160 153 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 IFNA14P01570 189 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 KDELR2P33947 212 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 MAGEB1P43366 347 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 GPR6P46095 362 aaPredicted RBP16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 YAP1P46937 504 aaKnown RBP16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 DAP3P51398 398 aaKnown RBP16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 CDH15P55291 814 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 FMODQ06828 376 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 MAPRE2Q15555 327 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 NKPD1Q17RQ9 610 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 ARMC4Q5T2S8 1044 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 NSMAFQ92636 917 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 HDAC2Q92769 488 aaKnown RBP16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 RDH5Q92781 318 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 SEPHS2Q99611 448 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 ARMCX1Q9P291 453 aa16.29■□□□□ 0.2
TM6SF1-201ENST00000258909 IGKV1D-43A0A0B4J1Z2 117 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 FAM220BPB1ANY3 271 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 MMP7P09237 267 aaPredicted RBP16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 TOP3AQ13472 1001 aaPredicted RBP16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 TBC1D28Q2M2D7 210 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 POU5F2Q8N7G0 328 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 PCYOX1LQ8NBM8 494 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 CPEB3Q8NE35 698 aaKnown RBP16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 OR2T12Q8NG77 320 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 RCN3Q96D15 328 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 POLR2J2Q9GZM3 115 aaKnown RBP16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 POLR2J3Q9H1A7 115 aaKnown RBP16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 GID8Q9NWU2 228 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 RHCGQ9UBD6 479 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 TMEFF2Q9UIK5 374 aaPredicted RBP16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 UGT2A1Q9Y4X1 527 aa16.28■□□□□ 0.2
TM6SF1-201ENST00000258909 IQCMA0A1B0GVH7 501 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 TSPAN19P0C672 248 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 IFI30P13284 250 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 CCNOP22674 350 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 THBS2P35442 1172 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 PLP2Q04941 152 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 CD47Q08722 323 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 PABPC1L2AQ5JQF8 200 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 DPPA2Q7Z7J5 298 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 IGFN1Q86VF2 1251 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 MICU2Q8IYU8 434 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 CLDN22Q8N7P3 220 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 CLDND2Q8NHS1 167 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 SYNPRQ8TBG9 265 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 LIPHQ8WWY8 451 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 LPAR2Q9HBW0 351 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 ZNF275Q9NSD4 429 aaPredicted RBP16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 ZNF346Q9UL40 294 aaKnown RBP16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 A4GNTQ9UNA3 340 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 SNX13Q9Y5W8 968 aa16.27■□□□□ 0.19
TM6SF1-201ENST00000258909 SLC22A23A1A5C7 686 aa16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 PPIHO43447 177 aaKnown RBP16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 CDC14BO60729 498 aa16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 IGF2P01344 180 aa16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 THRBP10828 461 aa16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 ACHEP22303 614 aa16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 UCP2P55851 309 aa16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 KLF3P57682 345 aaPredicted RBP16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 SELENOWP63302 87 aa16.26■□□□□ 0.19
TM6SF1-201ENST00000258909 GUCY1A3Q02108 690 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms