RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TVP23AA6NH52 213 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HSPB2A8KAH6 182 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 F8WDY8 70 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 MAGEB4O15481 346 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 WIPF1O43516 503 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TK1P04183 234 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR5G3P0C626 314 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR5AC1P0C628 307 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CEACAM1P13688 526 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SDC2P34741 201 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 BTCP35070 178 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 GJA5P36382 358 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CCL7P80098 99 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ST3GAL4Q11206 333 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TTLL4Q14679 1199 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ELAVL1Q15717 326 aaKnown RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HSPB2Q16082 182 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 RBBP7Q16576 425 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SRSF7Q16629 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ZSWIM7Q19AV6 140 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 IQCJQ1A5X6 159 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 C18orf21Q32NC0 220 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CAPN13Q6MZZ7 669 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 LARP4Q71RC2 724 aaKnown RBP eCLIP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 XYLT1Q86Y38 959 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 RIMKLAQ8IXN7 391 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SDR9C7Q8NEX9 313 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR9I1Q8NGQ6 314 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ADAMTS17Q8TE56 1095 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 PPP1R14AQ96A00 147 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ANKRD9Q96BM1 317 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CGRRF1Q99675 332 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SPON2Q9BUD6 331 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 PBX4Q9BYU1 374 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 MED20Q9H944 212 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ACTR8Q9H981 624 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ABI3Q9P2A4 366 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 PILRBQ9UKJ0 227 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 FLVCR1Q9Y5Y0 555 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 NDUFB9Q9Y6M9 179 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 COX11Q9Y6N1 276 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ATRNL1Q5VV63 1379 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 FXYD6-FXYD2A0A087WZ82 144 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 OR7C2O60412 319 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 TNFSF15O95150 251 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 SNAI1O95863 264 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-201ENST00000258733 IGHA2P01877 340 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 CPEP16870 476 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 CD22P20273 847 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 GABRA4P48169 554 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 BIDP55957 195 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 WNT3P56703 355 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 RPL32P62910 135 aaKnown RBP7.05□□□□□ -1.28
GPNMB-201ENST00000258733 PAX2Q02962 417 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 MAD2L1BPQ15013 274 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-201ENST00000258733 UBE2V2Q15819 145 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 ANKRD34AQ69YU3 496 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 MTURNQ8N3F0 131 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 OR2AK2Q8NG84 335 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 RPLP0P6Q8NHW5 317 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 RNF133Q8WVZ7 376 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 SMPDL3BQ92485 455 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 DAZLQ92904 295 aaKnown RBP7.05□□□□□ -1.28
GPNMB-201ENST00000258733 SLC25A46Q96AG3 418 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 PIK3IP1Q96FE7 263 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 OR6C1Q96RD1 312 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 UBL7Q96S82 380 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-201ENST00000258733 FSD1LQ9BXM9 530 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 FXYD6Q9H0Q3 95 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM185BQ9H7F4 350 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 HRASLSQ9HDD0 168 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM160Q9NX00 188 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 FRRS1LQ9P0K9 344 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 TSSC4Q9Y5U2 329 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-201ENST00000258733 NUP98P52948 1817 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 FIGNL2A6NMB9 653 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF670-ZNF695F2Z2N8 137 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 PDE6DO43924 150 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 RAB36O95755 333 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 HPXP02790 462 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 RLN1P04808 185 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 CFIP05156 583 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 DLSTP36957 453 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 ST3GAL3Q11203 375 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 PMS2P11Q13670 270 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 KEAP1Q14145 624 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 GNMTQ14749 295 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 SNAI3Q3KNW1 292 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 SLCO4C1Q6ZQN7 724 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 GBGT1Q8N5D6 347 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 SMIM20Q8N5G0 67 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 OR4A4PQ8NGN8 299 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 OR9A4Q8NGU2 314 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 SUN3Q8TAQ9 357 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 PIGBQ92521 554 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 MOAP1Q96BY2 351 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 PHYHIPLQ96FC7 376 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 IL17FQ96PD4 163 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 SULT4A1Q9BR01 284 aa7.05□□□□□ -1.28
GPNMB-201ENST00000258733 MIEN1Q9BRT3 115 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms