RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SLC22A23A1A5C7 686 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 DVL2O14641 736 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 MT-ND5P03915 603 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 CTLA4P16410 223 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 B3GALT5-AS1P59052 145 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 TMPPEQ6ZT21 453 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 NRARPQ7Z6K4 114 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 PXKQ7Z7A4 578 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-201ENST00000254816 THAP4Q8WY91 577 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 NEDD4LQ96PU5 975 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 PIGQQ9BRB3 760 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 VSX1Q9NZR4 365 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-201ENST00000254816 CD8B2A6NJW9 211 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 PRR32B1ATL7 298 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 CASKO14936 926 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 CD8BP10966 210 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 IL7P13232 177 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 GDF1P27539 372 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 FMODQ06828 376 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 FOXO1Q12778 655 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 CAMK2BQ13554 666 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 WIPI1Q5MNZ9 446 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-201ENST00000254816 IGF2-ASQ6U949 168 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 VASH1Q7L8A9 365 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-201ENST00000254816 AKAP14Q86UN6 197 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 TIGD4Q8IY51 512 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 MIB2Q96AX9 1013 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 DIRAS2Q96HU8 199 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 GSTK1Q9Y2Q3 226 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 KLHDC2Q9Y2U9 406 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 LOC400499M0QZD8 3231 aa16.9■□□□□ 0.3
TRIM47-201ENST00000254816 IGHV3-15A0A0B4J1V0 119 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 A0A1W2PNV4 684 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 A0A1W2PQ09 198 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 FZD7O75084 574 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 PSKH1P11801 424 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 ZNF17P17021 662 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 DAP3P51398 398 aaKnown RBP16.89■□□□□ 0.29
TRIM47-201ENST00000254816 BIDP55957 195 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 TMEM225Q6GV28 225 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 CD200R1LQ6Q8B3 271 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 SLC16A9Q7RTY1 509 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 OR2M7Q8NG81 312 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 SNX33Q8WV41 574 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 MED18Q9BUE0 208 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 MARCH7Q9H992 704 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 ZFP64Q9NPA5 681 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 TRIM36Q9NQ86 728 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 SHISA3A0PJX4 238 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 SLC35F4A4IF30 521 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 GABRPO00591 440 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 TNFSF11O14788 317 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 HLA-DQA2P01906 255 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 FKBP2P26885 142 aaKnown RBP16.89■□□□□ 0.29
TRIM47-201ENST00000254816 SULF2Q8IWU5 870 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 UEVLDQ8IX04 471 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 OR6N2Q8NGY6 317 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 KLHL13Q9P2N7 655 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 COMMD3Q9UBI1 195 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 GNG8Q9UK08 70 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 ING1Q9UK53 422 aaPredicted RBP16.89■□□□□ 0.29
TRIM47-201ENST00000254816 PAIP2BQ9ULR5 123 aaKnown RBP16.89■□□□□ 0.29
TRIM47-201ENST00000254816 FKBP7Q9Y680 259 aa16.89■□□□□ 0.29
TRIM47-201ENST00000254816 PTPRZ1P23471 2315 aaPredicted RBP16.88■□□□□ 0.29
TRIM47-201ENST00000254816 A0A0J9YW62 118 aa16.88■□□□□ 0.29
TRIM47-201ENST00000254816 TRDV1A0A1B0GX56 115 aa16.88■□□□□ 0.29
TRIM47-201ENST00000254816 FGF9P31371 208 aaPredicted RBP16.88■□□□□ 0.29
TRIM47-201ENST00000254816 SLC35A1P78382 337 aa16.88■□□□□ 0.29
TRIM47-201ENST00000254816 DDI2Q5TDH0 399 aa16.88■□□□□ 0.29
TRIM47-201ENST00000254816 NHLRC1Q6VVB1 395 aa16.88■□□□□ 0.29
TRIM47-201ENST00000254816 FANCFQ9NPI8 374 aa16.88■□□□□ 0.29
TRIM47-201ENST00000254816 AKAP13Q12802 2813 aa16.88■□□□□ 0.29
TRIM47-201ENST00000254816 IGLV1-36A0A0B4J1U3 117 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 IGKV1D-43A0A0B4J1Z2 117 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 FABP12A6NFH5 140 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 PMS2P2O95744 297 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 RFX2P48378 723 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 STARP49675 285 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 CLDN20P56880 219 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 RAC1P63000 192 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 CDONQ4KMG0 1287 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 ARL9Q6T311 187 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 DPY19L4Q7Z388 723 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 IL17RDQ8NFM7 739 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 ADAD1Q96M93 576 aaKnown RBP16.87■□□□□ 0.29
TRIM47-201ENST00000254816 SNX18Q96RF0 628 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 KCNK17Q96T54 332 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 FAM173AQ9BQD7 235 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 BOKQ9UMX3 212 aaPredicted RBP16.87■□□□□ 0.29
TRIM47-201ENST00000254816 COA3Q9Y2R0 106 aaPredicted RBP16.87■□□□□ 0.29
TRIM47-201ENST00000254816 A6NIZ1 184 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 AQP7P3A6NL99 342 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 PSMB10P40306 273 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 RAP1BP61224 184 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 RAP1AP62834 184 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 SLC3A1Q07837 685 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 MEP1BQ16820 701 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 UBQLNLQ8IYU4 475 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 ADPRHL1Q8NDY3 354 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms