RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 AQP8O94778 261 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 HLA-DQA2P01906 255 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 ZNF133P52736 654 aaPredicted RBP12.65□□□□□ -0.38
SDF2-201ENST00000247020 CLDN20P56880 219 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 RPS25P62851 125 aaKnown RBP12.65□□□□□ -0.38
SDF2-201ENST00000247020 SLC17A1Q14916 467 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 PCK2Q16822 640 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 VASNQ6EMK4 673 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 ABLIM2Q6H8Q1 611 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 LYPD4Q6UWN0 246 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 CREB3L2Q70SY1 520 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 MS4A15Q8N5U1 240 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 SLC26A10Q8NG04 563 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 SNIP1Q8TAD8 396 aaKnown RBP12.65□□□□□ -0.38
SDF2-201ENST00000247020 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 INTS12Q96CB8 462 aaKnown RBP12.65□□□□□ -0.38
SDF2-201ENST00000247020 PELI1Q96FA3 418 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 SMAD5Q99717 465 aaKnown RBP12.65□□□□□ -0.38
SDF2-201ENST00000247020 MED18Q9BUE0 208 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 SRXN1Q9BYN0 137 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 KCNN2Q9H2S1 579 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 MRPL22Q9NWU5 206 aaKnown RBP12.65□□□□□ -0.38
SDF2-201ENST00000247020 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 COA3Q9Y2R0 106 aaPredicted RBP12.65□□□□□ -0.38
SDF2-201ENST00000247020 KCNMB2Q9Y691 235 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 CEP250Q9BV73 2442 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 DCDC2BA2VCK2 349 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 TVP23AA6NH52 213 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 METTL15A6NJ78 407 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SMAD9O15198 467 aaKnown RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 ACTL6AO96019 429 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 IL1AP01583 271 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 KRT8P05787 483 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SOX6P35712 828 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 MAGEA5P43359 124 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 LHX2P50458 406 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SUCLG1P53597 346 aaKnown RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 HCCSP53701 268 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SIRPAP78324 504 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 CDK5R1Q15078 307 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 DEFB109BQ30KR1 87 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 TP53I3Q53FA7 332 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SLC18B1Q6NT16 456 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 DPY19L4Q7Z388 723 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 GLB1L2Q8IW92 636 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 RFLNBQ8N5W9 214 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SYT14Q8NB59 555 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 OR9K2Q8NGE7 335 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 OR10D3Q8NH80 312 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SMIM19Q96E16 107 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 KCTD7Q96MP8 289 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 TTYH2Q9BSA4 534 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SLIRPQ9GZT3 109 aaKnown RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 RERGLQ9H628 205 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 ST6GALNAC2Q9UJ37 374 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 GNG8Q9UK08 70 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 RCE1Q9Y256 329 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 ARPC4-TTLL3A0A0A6YYG9 625 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 ZNF593O00488 134 aaPredicted RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 GABRPO00591 440 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 GPRIN2O60269 458 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 RAMP1O60894 148 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 TMCC2O75069 709 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 RGS9O75916 674 aaPredicted RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 SERPINA3P01011 423 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 ZNF823P16415 610 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 ZNF708P17019 499 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 PEX19P40855 299 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 CLDN17P56750 224 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 PPIAP62937 165 aaKnown RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 ADAM8P78325 824 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 FOXC1Q12948 553 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SLC10A1Q14973 349 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 SLC25A47Q6Q0C1 308 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 MEIOBQ8N635 442 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 ZFP41Q8N8Y5 198 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 TBC1D15Q8TC07 691 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 SMAP2Q8WU79 429 aaPredicted RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 TMEM54Q969K7 222 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 PGLYRP3Q96LB9 341 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 EMC6Q9BV81 110 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 NXF2Q9GZY0 626 aaKnown RBP12.64□□□□□ -0.39
SDF2-201ENST00000247020 MMP27Q9H306 513 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 ZDHHC11Q9H8X9 412 aa12.64□□□□□ -0.39
SDF2-201ENST00000247020 PNMA8CA0A1B0GUJ8 204 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 FAM166BA8MTA8 275 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 EFSO43281 561 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 CYTIPO60759 359 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 ZNF432O94892 652 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 ABHD16AO95870 558 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 LAP3P28838 519 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 TGFBR1P36897 503 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 CLDN18P56856 261 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 FABP5Q01469 135 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 ROR2Q01974 943 aaKnown RBP12.63□□□□□ -0.39
SDF2-201ENST00000247020 ROM1Q03395 351 aa12.63□□□□□ -0.39
SDF2-201ENST00000247020 FMODQ06828 376 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms