RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MSX1P28360 303 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 BAXQ07812 192 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 SEMA3BQ13214 749 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 HNRNPA1L2Q32P51 320 aaKnown RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 TOMM20LQ6UXN7 152 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 LRRTM3Q86VH5 581 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 CMTM4Q8IZR5 234 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 SUMF1Q8NBK3 374 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 OR13C8Q8NGS7 320 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 CRYGNQ8WXF5 182 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 DLL4Q9NR61 685 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 A0A0B4J203 849 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TCRBV16S1A1N1A0A5B0 115 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TSPAN12O95859 305 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 ZNF728P0DKX0 622 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 CALCBP10092 127 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 MMP11P24347 488 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 ECH1Q13011 328 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 GLYATL3Q5SZD4 288 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 CCNJQ5T5M9 372 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 OR2A2Q6IF42 318 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TP53I13Q8NBR0 393 aaPredicted RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 NLGN4YQ8NFZ3 816 aaPredicted RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 RXFP4Q8TDU9 374 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TVP23CQ96ET8 276 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 PDCD1LG2Q9BQ51 273 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TMEM59Q9BXS4 323 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TPSD1Q9BZJ3 242 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 NPIPB15A6NHN6 443 aaPredicted RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 M0R082 166 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 OTX2P32243 289 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 CARD18P57730 90 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 ERVK-16P61578 105 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TRA2BP62995 288 aaKnown RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 ALKBH1Q13686 389 aaKnown RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 ABHD17BQ5VST6 288 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 OR2W3Q7Z3T1 314 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 HSD17B13Q7Z5P4 300 aaPredicted RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 TMEM151BQ8IW70 566 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 GABRG1Q8N1C3 465 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 ZNF383Q8NA42 475 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 OR51A4Q8NGJ6 313 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 PPP1R1CQ8WVI7 109 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 ALG12Q9BV10 488 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 MMP24Q9Y5R2 645 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 NXPH3O95157 252 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 ZNF43P17038 809 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 EFNA3P52797 238 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 MARCH8Q5T0T0 291 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 MOB1BQ7L9L4 216 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 NAXDQ8IW45 347 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 RNF113BQ8IZP6 322 aaKnown RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 OR5M1Q8NGP8 315 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 OR13D1Q8NGV5 346 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TECTBQ96PL2 329 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 TNFRSF13CQ96RJ3 184 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 OR51I2Q9H344 312 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 ACER3Q9NUN7 267 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 LAMP3Q9UQV4 416 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 MYH1P12882 1939 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 MYH4Q9Y623 1939 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 FITM1A5D6W6 292 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ZAR1LA6NP61 321 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 AQP7O14520 342 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 PHF1O43189 567 aaPredicted RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 CST2P09228 141 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ADRA1AP35348 466 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 FOLR3P41439 243 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 LBX1P52954 281 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 LCN6P62502 163 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 SLC17A1Q14916 467 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 GUK1Q16774 197 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ST3GAL2Q16842 350 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ZNF528Q3MIS6 628 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 LIPIQ6XZB0 460 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ADGRE4PQ86SQ3 457 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 FAM26EQ8N5C1 309 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ZFP62Q8NB50 900 aaPredicted RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 PDLIM5Q96HC4 596 aaKnown RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 ZCCHC4Q9H5U6 513 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 RAB9BQ9NP90 201 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 MMP26Q9NRE1 261 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 GPR55Q9Y2T6 319 aaPredicted RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 LOC102724200A0A096LPH7 203 aaPredicted RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 EPHA2P29317 976 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 RPL12P30050 165 aaKnown RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 XCR1P46094 333 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 KCNJ10P78508 379 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 OTUD1Q5VV17 481 aaPredicted RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 CBLN2Q8IUK8 224 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 BVESQ8NE79 360 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 OR5AP2Q8NGF4 316 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 IL1F10Q8WWZ1 152 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 G3V3Q6 166 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 GPR31O00270 319 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 TK1P04183 234 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 CA3P07451 260 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms