RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 HS3ST1O14792 307 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 GPX5O75715 221 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 NRASP01111 189 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 COL5A2P05997 1499 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 ZNF93P35789 620 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 CHRNA7P36544 502 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CDX1P47902 265 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 EXOSC2Q13868 293 aaKnown RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 TIGD3Q6B0B8 471 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ASCL5Q7RTU5 278 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 DDB2Q92466 427 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CTRCQ99895 268 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 OR6C2Q9NZP2 312 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 RCL1Q9Y2P8 373 aaKnown RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 ENPP4Q9Y6X5 453 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 RAB3DO95716 219 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CDK1P06493 297 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 RAB6AP20340 208 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 TP53I13Q8NBR0 393 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 ATG101Q9BSB4 218 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 C1QTNF6Q9BXI9 259 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CTSFQ9UBX1 484 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 PXDNLA1KZ92 1463 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ZNF487B1APH4 448 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 UBBP0CG47 229 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 OR5AS1Q8N127 324 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CLRN3Q8NCR9 226 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 JOSD2Q8TAC2 188 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ESAMQ96AP7 390 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 XRN1Q8IZH2 1706 aaKnown RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 K7EPK0 472 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CCL21O00585 134 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 PRKRAO75569 313 aaKnown RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 SOX14O95416 240 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CSF3P09919 207 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ACP2P11117 423 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 PIGAP37287 484 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 TRA2BP62995 288 aaKnown RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 GPR18Q14330 331 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ZNF266Q14584 549 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 STUMQ69YW2 141 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 FA2HQ7L5A8 372 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 FAM71E2Q8N5Q1 922 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 OR10A7Q8NGE5 316 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 OR52R1Q8NGF1 315 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 BLNKQ8WV28 456 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 NUDT11Q96G61 164 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 NPAS1Q99742 590 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 HDAC8Q9BY41 377 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 HEXA-AS1Q9H8Q6 139 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CRLF2Q9HC73 371 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 PURGQ9UJV8 347 aaKnown RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 PITPNC1Q9UKF7 332 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ITGB4P16144 1822 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ATRNO75882 1429 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 TRGV5A0A0B4J1U4 118 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 HLA-DQB2P05538 268 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CD27P26842 260 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 AKR1C3P42330 323 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 IL13RA1P78552 427 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 POU3F1Q03052 451 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 EVX2Q03828 476 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 EMX2Q04743 252 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CD276Q5ZPR3 534 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 LCN10Q6JVE6 187 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ZNF343Q6P1L6 599 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CCDC190Q86UF4 302 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 DNAJC5GQ8N7S2 189 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 SLC24A4Q8NFF2 622 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 AQP10Q96PS8 301 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ADOQ96SZ5 270 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 DMRT3Q9NQL9 472 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 C1GALT1Q9NS00 363 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 NECAP2Q9NVZ3 263 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 EXO1Q9UQ84 846 aaKnown RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 A0A1W2PS18 150 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 GAPDHSO14556 408 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 EGFP01133 1207 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 CD48P09326 243 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 SHC1P29353 583 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ARL13AQ5H913 290 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 ZNF441Q8N8Z8 693 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 TTC9Q92623 222 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 FUNDC2Q9BWH2 189 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 MRPL37Q9BZE1 423 aaKnown RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 MS4A5Q9H3V2 200 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 STRCQ7RTU9 1775 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 DUOX1Q9NRD9 1551 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 TEX50A0A1B0GTY4 177 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 SLC22A20A6NK97 555 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 PRSS2P07478 247 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ACAA1P09110 424 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 OR3A4PP47883 348 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 PAQR6Q6TCH4 344 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 MAML2Q8IZL2 1156 aaPredicted RBP3.18□□□□□ -1.9
NEB-201ENST00000172853 OR8I2Q8N0Y5 310 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 C16orf70Q9BSU1 422 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 ZNF320A2RRD8 509 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 PIAS2O75928 621 aa3.18□□□□□ -1.9
NEB-201ENST00000172853 C4BPAP04003 597 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms