RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Csn1s2aQ02862 184 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rnf166Q3U9F6 237 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Prtn3Q61096 254 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tbccd1Q640P7 552 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ube2j2Q6P073 259 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1222Q7TR02 311 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tnfsfm13Q8BXS2 410 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm9999Q8C5Y2 53 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Epsti1Q8VDI1 314 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1351Q8VGU6 319 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Odf4Q8VI88 290 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Yipf2Q99LP8 312 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Dusp22Q99N11 184 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Msantd3Q9CR78 275 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Chst11Q9JME2 352 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Padi1Q9Z185 662 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tcrg-V7A0A0A6YYE8 116 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Iglc4A0A0G2JEK5 104 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr560A0A1B0GSU5 314 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm9008E9PVG0 424 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Srp54bE9PXC0 504 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r41E9Q5C7 852 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r48E9Q5D8 855 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r40F6W043 852 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm21876F6XK35 94 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr152G3X9L8 316 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 OpcmlG5E8G3 345 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r36K7N741 852 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 EomesO54839 707 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Oprd1P32300 372 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ca10P61215 328 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rps4xP62702 263 aaKnown RBP11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Prss55Q14BX2 321 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Lin28bQ45KJ6 247 aaKnown RBP11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 2900092C05RikQ5I0V9 184 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Epha6Q62413 1035 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Lrrc75aQ7TSF4 339 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rxfp3Q8BGE9 472 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Mettl27Q8BGM4 238 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 2810021J22RikQ8BIB6 539 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rnf26Q8BUH7 424 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 C1qtnf7Q8BVD7 289 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gpr157Q8C206 330 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Efcab7Q8VDY4 628 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Wdsub1Q9D0I6 474 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ccdc167Q9D162 97 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Eif3fQ9DCH4 361 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Clec3aQ9EPW4 196 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr2Q9QWU6 327 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 Scnn1gQ9WU39 655 aa11.8□□□□□ -0.52
Nup88-203ENSMUST00000108531 4930467E23RikD3Z1P8 350 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn1r91E9PZR7 307 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tmem44E9Q4M0 433 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm15319E9Q637 350 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rdh19G5E8H9 318 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn1r57K7N731 310 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Prkar1bP12849 381 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 S100a1P56565 94 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tmem14aP56983 99 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rps15P62843 145 aaKnown RBP11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cobll1Q3UMF0 1273 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm10750Q3V0I0 133 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 4930512M02RikQ5SQK8 218 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ltc4sQ60860 150 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Dio1Q61153 257 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 NnatQ61979 81 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm21119Q8C646 350 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Kctd20Q8CDD8 419 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 HinfpQ8K1K9 503 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr672Q8VG28 312 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr676Q8VGZ9 317 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Park7Q99LX0 189 aaKnown RBP11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 OgfrQ99PG2 633 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ndufb2Q9CPU2 105 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Mgst3Q9CPU4 153 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Sp6Q9ESX2 376 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Slc15a1Q9JIP7 709 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Calm4Q9JM83 148 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 AireQ9Z0E3 552 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cacna1eQ61290 2272 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Trbv23A0A0A6YWQ1 115 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm2022A0A1Y7VLT7 144 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tox2A2A472 547 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Aadacl3A2A7Z8 408 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1224-ps1A3KGY4 311 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1511E9PWU0 318 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Prdm13E9PZZ1 754 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1510E9PZZ6 318 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn1r115K7N6Y3 295 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Agpat1O35083 285 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Klf9O35739 244 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rit1P70426 219 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cass4Q08EC4 804 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 ScimpQ3UU41 150 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Nufip2Q5F2E7 692 aaKnown RBP11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ift52Q62559 426 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gpatch2Q7TQC7 527 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tmem108Q8BHE4 574 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Fbxo9Q8BK06 437 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Lpar4Q8BLG2 370 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms