RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Wdsub1Q9D0I6 474 aa13.72□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 4933402D24RikQ9D4D3 167 aa13.72□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Gabra4Q9D6F4 552 aa13.72□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Mllt1Q9ERL0 547 aa13.72□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Slco1b2Q9JJL3 689 aa13.72□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Skp1Q9WTX5 163 aa13.72□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Asah1Q9WV54 394 aa13.72□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Col4a2P08122 1707 aa13.72□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Parp4E9PYK3 1969 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Gm28710A0A1B0GR31 962 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 A0A286YCH8 300 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 3110040M04RikA0A286YDK0 300 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 A0A286YE43 300 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Gm8871F7AXK2 190 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 TpbpaP13438 124 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Art5P70352 309 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Tmprss11bQ14C59 416 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Defb41Q30KP6 65 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Slc2a6Q3UDF0 497 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Rcor3Q6PGA0 451 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Olfr1133Q7TR44 313 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Olfr429Q7TRW1 312 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Rtp2Q80ZI2 223 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Fam199xQ8K2D0 388 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Defb36Q8K3U4 67 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Olfr1143Q8VEU8 314 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Cmtm3Q99LJ5 184 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Dusp22Q99N11 184 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Rnf128Q9D304 428 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Q9DAR0 182 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 SpastQ9QYY8 614 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Actr10Q9QZB7 417 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Decr2Q9WV68 292 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Ppp1r17Q9Z2E4 159 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Brca2P97929 3329 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Gm45711E0CXA2 391 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Gm5407E9Q7Q1 248 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Vmn2r89O35199 507 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Nipsnap1O55125 284 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Lin7bO88951 207 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 P06336 421 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Zfp13P10754 512 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Rnf166Q3U9F6 237 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 ScimpQ3UU41 150 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 XkrxQ5GH68 449 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Il10rbQ61190 349 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Kcnc3Q63959 769 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Arhgef4Q7TNR9 484 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Cml2Q8CHQ9 238 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Nsa2Q9CR47 260 aaKnown RBP13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 IqchQ9D2K4 1071 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Q9D8N1 392 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Kiaa0141Q9DCV6 510 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 Yipf7Q9JIM5 254 aa13.71□□□□□ -0.21
Nkx3-1-201ENSMUST00000022646 SptbP15508 2128 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Prss47A0A0N4SVQ0 395 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Aadacl3A2A7Z8 408 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Gm15446D3Z5Y8 553 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Ighg2cF6TQW2 404 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 P01864 335 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Hsd11b1P50172 292 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Tgif1P70284 272 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Lrrc28Q3TX51 367 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Shisa3Q3UPR0 238 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Tnfaip3Q60769 775 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Heatr6Q6P1G0 1184 aaKnown RBP13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Cpeb4Q7TN98 729 aaKnown RBP13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Slc35d3Q8BGF8 422 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Fam221aQ8C790 301 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Cacnb4Q8R0S4 519 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Olfr518Q8VEW1 333 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Olfr676Q8VGZ9 317 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Shisa5Q9D7I0 235 aa13.71□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Olfr1224-ps1A3KGY4 311 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Tmem229aB9EJI9 371 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 DgkaO88673 730 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 AdaP03958 352 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 NfkbidQ2TB02 327 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Ccdc190Q3URK1 288 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Zfp157Q6PCM4 567 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 GmdsQ8K0C9 372 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Plcz1Q8K4D7 647 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Ccdc115Q8VE99 180 aaKnown RBP13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Olfr1487Q8VFQ6 315 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 B3gat1Q9CW73 334 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Vmn1r175K7N6T9 304 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Ca3P16015 260 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Tnfrsf1bP25119 474 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 DhpsQ3TXU5 369 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Pea15Q62048 130 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Rps27Q6ZWU9 84 aaKnown RBP13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Eri1Q7TMF2 345 aaKnown RBP13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Olfr1321Q7TQW4 319 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Q8R3Y5 413 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Rpusd1Q8VCZ8 306 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Olfr510Q8VEW6 314 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Plpp7Q91WB2 271 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Tnk1Q99ML2 666 aa13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Pno1Q9CPS7 248 aaKnown RBP13.7□□□□□ -0.22
Nkx3-1-201ENSMUST00000022646 Mgat4cQ9D306 478 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms