RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SNX18Q96RF0 628 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 ASB6Q9NWX5 421 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 GLTPQ9NZD2 209 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 ALPK2Q86TB3 2170 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 MED12LQ86YW9 2145 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 SMG1Q96Q15 3661 aaKnown RBP15.47■□□□□ 0.07
PHGDH-230ENST00000641927 B8ZZF3 427 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 AHCYL1O43865 530 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 WBP4O75554 376 aaKnown RBP15.47■□□□□ 0.07
PHGDH-230ENST00000641927 NR2C1P13056 603 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 CA7P43166 264 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 NUDT6P53370 316 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 APOFQ13790 326 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 OCLNQ16625 522 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 SMN1Q16637 294 aaKnown RBP15.47■□□□□ 0.07
PHGDH-230ENST00000641927 THEM4Q5T1C6 240 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 MEDAGQ5VYS4 303 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 NXNL2Q5VZ03 156 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 C20orf196Q8IYI0 205 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 OR6V1Q8N148 313 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 ZNF786Q8N393 782 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 OR2T4Q8NH00 348 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 DDOQ99489 341 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 SLCO5A1Q9H2Y9 848 aa15.47■□□□□ 0.07
PHGDH-230ENST00000641927 RP1L1Q8IWN7 2480 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-230ENST00000641927 SNTNA6NMZ2 147 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 DCTN6O00399 190 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 UPK3AO75631 287 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 SMNDC1O75940 238 aaKnown RBP eCLIP15.46■□□□□ 0.07
PHGDH-230ENST00000641927 QDPRP09417 244 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 CTLA4P16410 223 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 SPI1P17947 270 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 EDNRAP25101 427 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 PYCR1P32322 319 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 KIR2DL2P43627 348 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-230ENST00000641927 CDH11P55287 796 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 IGFBP7Q16270 282 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 PHYHD1Q5SRE7 291 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 AADACL4Q5VUY2 407 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 DNM1P34Q6PK57 102 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 NCCRP1Q6ZVX7 275 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-230ENST00000641927 GID4Q8IVV7 300 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 NAXEQ8NCW5 288 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 BPIFB6Q8NFQ5 453 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 OR6K6Q8NGW6 343 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 FNDC8Q8TC99 324 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 RFKQ969G6 155 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 TMEM54Q969K7 222 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 MCHR2Q969V1 340 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 ZFP3Q96NJ6 502 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 ALKBH3Q96Q83 286 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-230ENST00000641927 ULBP2Q9BZM5 246 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 AMBNQ9NP70 447 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 B3GAT2Q9NPZ5 323 aa15.46■□□□□ 0.07
PHGDH-230ENST00000641927 DOCK7Q96N67 2140 aa15.46■□□□□ 0.06
PHGDH-230ENST00000641927 ARHGAP21Q5T5U3 1957 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 CENPBD1B2RD01 187 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 E9PLN8 166 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 PRODHO43272 600 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 CRABP1P29762 137 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 SLC25A1P53007 311 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 GUSBP1Q15486 140 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 EIF2S3LQ2VIR3 472 aaKnown RBP15.45■□□□□ 0.06
PHGDH-230ENST00000641927 SLC25A30Q5SVS4 291 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 TSPO2Q5TGU0 170 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 VWA1Q6PCB0 445 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 ZNF843Q8N446 348 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 OR6K3Q8NGY3 331 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 FBLIM1Q8WUP2 373 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 FOXN4Q96NZ1 517 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 VKORC1Q9BQB6 163 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 NMNAT2Q9BZQ4 307 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 UPB1Q9UBR1 384 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 FOXD3Q9UJU5 478 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-230ENST00000641927 B9D1Q9UPM9 204 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 MEMO1Q9Y316 297 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 ZFYVE26Q68DK2 2539 aa15.45■□□□□ 0.06
PHGDH-230ENST00000641927 CCL21O00585 134 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 HLA-DQA2P01906 255 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 CRHP06850 196 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 CEACAM8P31997 349 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-230ENST00000641927 ETFDHQ16134 617 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 HIST3H3Q16695 136 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 C6orf141Q5SZD1 244 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 LRFN4Q6PJG9 635 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 B3GLCTQ6Y288 498 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 MEPCEQ7L2J0 689 aaKnown RBP15.44■□□□□ 0.06
PHGDH-230ENST00000641927 GALNT11Q8NCW6 608 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 RBM24Q9BX46 236 aaKnown RBP15.44■□□□□ 0.06
PHGDH-230ENST00000641927 CRLF2Q9HC73 371 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 SLC7A10Q9NS82 523 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 PRSS50Q9UI38 385 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.44■□□□□ 0.06
PHGDH-230ENST00000641927 FKBP7Q9Y680 259 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 IGKV1D-43A0A0B4J1Z2 117 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 A0A1W2PPL8 197 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 SH3D21A4FU49 640 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 OR6C65A6NJZ3 312 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 XPNPEP2O43895 674 aa15.44■□□□□ 0.06
PHGDH-230ENST00000641927 FAM20BO75063 409 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms