RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 FGF20Q9NP95 211 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-223ENST00000640640 OR52A1Q9UKL2 312 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 ETV7Q9Y603 341 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 TNS1Q9HBL0 1735 aaKnown RBP16.07■□□□□ 0.16
SCARB2-223ENST00000640640 DDAH2O95865 285 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 EMDP50402 254 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 CTF1Q16619 201 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 MPEG1Q2M385 716 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 OR2L13Q8N349 312 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 OR4N2Q8NGD1 307 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 B3GALT1Q9Y5Z6 326 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 TRABD2BA6NFA1 517 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 RAP2BP61225 183 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 PLCXD3Q63HM9 321 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 SLC7A5P1Q8MH63 180 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 MORN4Q8NDC4 146 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 DCUN1D4Q92564 292 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 SELENOIQ9C0D9 397 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 ENY2Q9NPA8 101 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 ZNF346Q9UL40 294 aaKnown RBP16.07■□□□□ 0.16
SCARB2-223ENST00000640640 TMEM184BQ9Y519 407 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-223ENST00000640640 A0A0A6YYH2 397 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 A6NJ64 397 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 PRAMEF4O60810 478 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 MTCP1P56278 107 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 PRAMEF9Q5VWM5 478 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 VN1R4Q7Z5H5 301 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 CADM3Q8N126 398 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 SYS1Q8N2H4 156 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 ESX1Q8N693 406 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 FGGYQ96C11 551 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 ZFP57Q9NU63 452 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 IL20Q9NYY1 176 aa16.07■□□□□ 0.16
SCARB2-223ENST00000640640 PCP4L1A6NKN8 68 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 NME1P15531 152 aaKnown RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 ZNF616Q08AN1 781 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 LCN10Q6JVE6 187 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 IDO2Q6ZQW0 420 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 LINC00696Q6ZRV3 163 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 OR6M1Q8NGM8 313 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 GON7Q9BXV9 100 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 CDCP1Q9H5V8 836 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 TRIM64CA6NLI5 447 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 IFNA5P01569 189 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 RPS27P42677 84 aaKnown RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 CARD18P57730 90 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 C21orf58P58505 322 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 GPNMBQ14956 572 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 STK11Q15831 433 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 EMC4Q5J8M3 183 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 XAF1Q6GPH4 301 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 C8orf82Q6P1X6 216 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 CMTM1Q8IZ96 169 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 KCNG3Q8TAE7 436 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 CD300LFQ8TDQ1 290 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 NRTNQ99748 197 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 KLHL13Q9P2N7 655 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 STEAP1Q9UHE8 339 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 GPR55Q9Y2T6 319 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 ZNF638Q14966 1978 aaKnown RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 TMEM82A0PJX8 343 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 SOX18P35713 384 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 HMGA2P52926 109 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 PNLIPRP2P54317 469 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 SEC61A1P61619 476 aaKnown RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 TNK1Q13470 666 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 PRSS41Q7RTY9 318 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 KIF18BQ86Y91 864 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 SLC22A24Q8N4F4 322 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 OR56B1Q8NGI3 324 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 ARHGDIGQ99819 225 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 ZMAT3Q9HA38 289 aaKnown RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 UNC13CQ8NB66 2214 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 C5orf67F2Z3F1 127 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 CNOT4O95628 575 aaKnown RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 POU2F2P09086 479 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 SSTR2P30874 369 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 TRAPPC6BQ86SZ2 158 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 KMT5CQ86Y97 462 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 SMAP2Q8WU79 429 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-223ENST00000640640 LRRC3BQ96PB8 259 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 GABRG3Q99928 467 aa16.06■□□□□ 0.16
SCARB2-223ENST00000640640 TRBV5-3A0A0A0MS03 114 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 OTOL1A6NHN0 477 aaPredicted RBP16.05■□□□□ 0.16
SCARB2-223ENST00000640640 PRSS23O95084 383 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 SLC2A1P11166 492 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 ELK1P19419 428 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 PTBP1P26599 531 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCARB2-223ENST00000640640 PTPN6P29350 595 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 ZNF93P35789 620 aaPredicted RBP16.05■□□□□ 0.16
SCARB2-223ENST00000640640 DLSTP36957 453 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 MOB3CQ70IA8 216 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 SULF2Q8IWU5 870 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 CNEP1R1Q8N9A8 125 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 RAB3CQ96E17 227 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 SGCZQ96LD1 299 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 NICN1Q9BSH3 213 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 EHFQ9NZC4 300 aa16.05■□□□□ 0.16
SCARB2-223ENST00000640640 MRPS28Q9Y2Q9 187 aaKnown RBP16.05■□□□□ 0.16
SCARB2-223ENST00000640640 LSM5Q9Y4Y9 91 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms