RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 ASB6Q9NWX5 421 aa7.78□□□□□ -1.16
HLA-B-258ENST00000640615 VSX1Q9NZR4 365 aaPredicted RBP7.78□□□□□ -1.16
HLA-B-258ENST00000640615 RCE1Q9Y256 329 aa7.78□□□□□ -1.16
HLA-B-258ENST00000640615 MYRFQ9Y2G1 1151 aa7.78□□□□□ -1.16
HLA-B-258ENST00000640615 TPRKBQ9Y3C4 175 aa7.78□□□□□ -1.16
HLA-B-258ENST00000640615 RPL36Q9Y3U8 105 aaKnown RBP7.78□□□□□ -1.16
HLA-B-258ENST00000640615 MED12Q93074 2177 aa7.78□□□□□ -1.16
HLA-B-258ENST00000640615 FREM3P0C091 2139 aa7.78□□□□□ -1.16
HLA-B-258ENST00000640615 SLC22A31A6NKX4 558 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 CENPBD1B2RD01 187 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 PTGES3LE9PB15 166 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 SS18L1O75177 396 aaPredicted RBP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 KHDRBS3O75525 346 aaKnown RBP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 KRT33AO76009 404 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 ZNF432O94892 652 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 QDPRP09417 244 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 CCDC159P0C7I6 412 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 DBTP11182 482 aaKnown RBP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 SPI1P17947 270 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 SLC2A5P22732 501 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 CRABP1P29762 137 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 AGTR1P30556 359 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 HTR1FP30939 366 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 NTF4P34130 210 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 ATP6V1E1P36543 226 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 PER3P56645 1201 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 SIRPAP78324 504 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 FMODQ06828 376 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 THEM4Q5T1C6 240 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 RTL6Q6ICC9 239 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 OR2A2Q6IF42 318 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 DNM1P34Q6PK57 102 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 B3GLCTQ6Y288 498 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 B3GNT6Q6ZMB0 384 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 NUFIP2Q7Z417 695 aaKnown RBP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 DOLPP1Q86YN1 238 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 C20orf196Q8IYI0 205 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 ZNF100Q8IYN0 542 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 GCNT2Q8N0V5 402 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 OR6V1Q8N148 313 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 GPR137CQ8N3F9 429 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 ZNF540Q8NDQ6 660 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 ST6GALNAC3Q8NDV1 305 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 OR6K6Q8NGW6 343 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 FNDC8Q8TC99 324 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 ZNRF4Q8WWF5 429 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 GGHQ92820 318 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 TMEM54Q969K7 222 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 INTS12Q96CB8 462 aaKnown RBP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 TEAD3Q99594 435 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 YTHDF1Q9BYJ9 559 aaKnown RBP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 NMNAT2Q9BZQ4 307 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 GP6Q9HCN6 339 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 PLCXD1Q9NUJ7 323 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 GLTPQ9NZD2 209 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 WARS2Q9UGM6 360 aaKnown RBP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 PSORS1C1Q9UIG5 152 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 SH3BGRL2Q9UJC5 107 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 BLOC1S6Q9UL45 172 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.77□□□□□ -1.17
HLA-B-258ENST00000640615 B9D1Q9UPM9 204 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 ZNF835Q9Y2P0 537 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 FKBP7Q9Y680 259 aa7.77□□□□□ -1.17
HLA-B-258ENST00000640615 COL12A1Q99715 3063 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 MPDZO75970 2070 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 MBD3L4A6NDZ8 208 aaPredicted RBP7.76□□□□□ -1.17
HLA-B-258ENST00000640615 MBD3L3A6NE82 208 aaPredicted RBP7.76□□□□□ -1.17
HLA-B-258ENST00000640615 CCDC182A6NF36 153 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 MBD3L5A6NJ08 208 aaPredicted RBP7.76□□□□□ -1.17
HLA-B-258ENST00000640615 DCTN6O00399 190 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 UPK3AO75631 287 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 GLCEO94923 617 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 APOL3O95236 402 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 TNFAIP8O95379 198 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 IGHV3-9P01782 118 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 HLA-DQA2P01906 255 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 LYNP07948 512 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 NR2C1P13056 603 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 CTLA4P16410 223 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 CRHBPP24387 322 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 EEF1B2P24534 225 aaKnown RBP7.76□□□□□ -1.17
HLA-B-258ENST00000640615 GSTT1P30711 240 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 MTNR1AP48039 350 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 CASP6P55212 293 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 ZNF91Q05481 1191 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 TMED1Q13445 227 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 ETFDHQ16134 617 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 HIST3H3Q16695 136 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 SLC35D3Q5M8T2 416 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 PHYHD1Q5SRE7 291 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 LCN1P1Q5VSP4 162 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 SEM1Q6ZVN7 128 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 AHSA2Q719I0 299 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 FAM214BQ7L5A3 538 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.76□□□□□ -1.17
HLA-B-258ENST00000640615 ZBTB46Q86UZ6 589 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 TMEM123Q8N131 208 aa7.76□□□□□ -1.17
HLA-B-258ENST00000640615 RPRMLQ8N4K4 120 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms