RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 MBLAC1A4D2B0 266 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-211ENST00000638889 ZNF726A6NNF4 738 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 XPO1O14980 1071 aaKnown RBP1.41□□□□□ -2.18
CCDC7-211ENST00000638889 ARPC3O15145 178 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 RP2O75695 350 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 CDRT1O95170 752 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 CDKN2BP42772 138 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 CX3CR1P49238 355 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 DUSP3P51452 185 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-211ENST00000638889 IRX3P78415 501 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-211ENST00000638889 SLC39A6Q13433 755 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 PDK4Q16654 411 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 DGUOKQ16854 277 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 KLHL38Q2WGJ6 581 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 TRIM40Q6P9F5 258 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 MFSD9Q8NBP5 474 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 MAGEE2Q8TD90 523 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-211ENST00000638889 TM4SF18Q96CE8 201 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 MED8Q96G25 268 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 NARS2Q96I59 477 aaKnown RBP1.41□□□□□ -2.18
CCDC7-211ENST00000638889 SLC38A2Q96QD8 506 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 DOK1Q99704 481 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 TPPP3Q9BW30 176 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 MRPL37Q9BZE1 423 aaKnown RBP1.41□□□□□ -2.18
CCDC7-211ENST00000638889 PALMDQ9NP74 551 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 ISYNA1Q9NPH2 558 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 SMOXQ9NWM0 555 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 KIAA1257Q9ULG3 409 aa1.41□□□□□ -2.18
CCDC7-211ENST00000638889 KIF16BQ96L93 1317 aa1.4□□□□□ -2.18
CCDC7-211ENST00000638889 TBX19O60806 448 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 IDH1O75874 414 aaKnown RBP1.4□□□□□ -2.19
CCDC7-211ENST00000638889 IFNB1P01574 187 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 IGHV2-5P01817 119 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 FGF1P05230 155 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 KRT8P05787 483 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 CAPN1P07384 714 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 GNAO1P09471 354 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 AK4P27144 223 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-211ENST00000638889 FDFT1P37268 417 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 ARG2P78540 354 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 CDK16Q00536 496 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 PRPSAP1Q14558 356 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 NADK2Q4G0N4 442 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 FAM78AQ5JUQ0 283 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 OR4F3Q6IEY1 312 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 KDM7AQ6ZMT4 941 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 TMEM179Q6ZVK1 233 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 PUSL1Q8N0Z8 303 aaKnown RBP1.4□□□□□ -2.19
CCDC7-211ENST00000638889 ZNF557Q8N988 423 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-211ENST00000638889 NOXO1Q8NFA2 376 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 OR4S2Q8NH73 311 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 SORT1Q99523 831 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 SH3GL3Q99963 347 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 RARRES2Q99969 163 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 SYNDIG1Q9H7V2 258 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 UBE2ZQ9H832 354 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-211ENST00000638889 ADAMTS13Q76LX8 1427 aa1.4□□□□□ -2.19
CCDC7-211ENST00000638889 NID2Q14112 1375 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 HIDE1A8MVS5 230 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 CBR3O75828 277 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 CCNE2O96020 404 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 IL4P05112 153 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 FABP3P05413 133 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 OR56A5P0C7T3 313 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 RPA2P15927 270 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 COL8A2P25067 703 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 OPRK1P41145 380 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 KIR3DL2P43630 455 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 RFX3P48380 749 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 SLC11A1P49279 550 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 CDH4P55283 916 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 PITPNAQ00169 270 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 PHYHD1Q5SRE7 291 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 PRMT9Q6P2P2 845 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 DNAJC24Q6P3W2 148 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 CEMP1Q6PRD7 247 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-211ENST00000638889 PEX26Q7Z412 305 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 MIR7-3HGQ8N6C7 128 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 CEP112Q8N8E3 955 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 OR2T34Q8NGX1 318 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 LKAAEAR1Q8TD35 194 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 ABHD3Q8WU67 409 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 ZCCHC13Q8WW36 166 aaKnown RBP1.39□□□□□ -2.19
CCDC7-211ENST00000638889 ZNF681Q96N22 645 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 TTC25Q96NG3 672 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 RBM14Q96PK6 669 aaKnown RBP1.39□□□□□ -2.19
CCDC7-211ENST00000638889 OR8B4Q96RC9 309 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 ZNF382Q96SR6 550 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 TIMM29Q9BSF4 260 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 PARD6BQ9BYG5 372 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.39□□□□□ -2.19
CCDC7-211ENST00000638889 CARHSP1Q9Y2V2 147 aaKnown RBP1.39□□□□□ -2.19
CCDC7-211ENST00000638889 NUP214P35658 2090 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-211ENST00000638889 CDHR2Q9BYE9 1310 aa1.39□□□□□ -2.19
CCDC7-211ENST00000638889 TRAV39A0A0B4J263 110 aa1.38□□□□□ -2.19
CCDC7-211ENST00000638889 FCMRO60667 390 aa1.38□□□□□ -2.19
CCDC7-211ENST00000638889 SCGNO76038 276 aa1.38□□□□□ -2.19
CCDC7-211ENST00000638889 HLA-DPB1P04440 258 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms