RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 RUNX1T1Q06455 604 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 TRAM2Q15035 370 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 EFNB3Q15768 340 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 CBLL1Q75N03 491 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 HDDC2Q7Z4H3 204 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 CPLX4Q7Z7G2 160 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 SKA3Q8IX90 412 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 OFCC1Q8IZS5 231 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 SYT14Q8NB59 555 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 LIPHQ8WWY8 451 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 MCHR2Q969V1 340 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 BPIFA2Q96DR5 249 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 HSH2DQ96JZ2 352 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 ZNF347Q96SE7 839 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 SH3GL3Q99963 347 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 PLK3Q9H4B4 646 aa14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 DENND2DQ9H6A0 471 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-259ENST00000638114 SONP18583 2426 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 SNX3O60493 162 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 TRMUO75648 421 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 FARS2O95363 451 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 CSF3P09919 207 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 ACADSP16219 412 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 NCK1P16333 377 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 DRD4P21917 467 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 PRDX6P30041 224 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 LSP1P33241 339 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 ZNF84P51523 738 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 LSM11P83369 360 aaKnown RBP eCLIP14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 RAB39AQ14964 217 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 LAPTM4AQ15012 233 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 SVOPLQ8N434 492 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 ANKS4BQ8N8V4 417 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 OR4K5Q8NGD3 323 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 FGFBP3Q8TAT2 258 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 ZNF75AQ96N20 296 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 MAN2C1Q9NTJ4 1040 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 STX18Q9P2W9 335 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 ABCD2Q9UBJ2 740 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 FBXL3Q9UKT7 428 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 SPEF1Q9Y4P9 236 aa14.49□□□□□ -0.09
CACNA1A-259ENST00000638114 JMJD1CQ15652 2540 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 HTR3EA5X5Y0 456 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 GMNCA6NCL1 334 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 CENPBD1B2RD01 187 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 FFAR1O14842 300 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 TSPAN19P0C672 248 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 SAGP10523 405 aaPredicted RBP14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 SLC25A16P16260 332 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 FUT4P22083 530 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 NR4A1P22736 598 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 PPOXP50336 477 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 TOP3AQ13472 1001 aaPredicted RBP14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 CARTPTQ16568 116 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 HIST3H3Q16695 136 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 ALG10Q5BKT4 473 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 ARMC4Q5T2S8 1044 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 MEX3DQ86XN8 651 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 NRMQ8IXM6 262 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 C10orf105Q8TEF2 133 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 MRPL13Q9BYD1 178 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 RNF121Q9H920 327 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 DYNLRB1Q9NP97 96 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 ADA2Q9NZK5 511 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 FBXO9Q9UK97 447 aaPredicted RBP14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 HIF3AQ9Y2N7 669 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 CMAHPQ9Y471 501 aa14.48□□□□□ -0.09
CACNA1A-259ENST00000638114 A0A096LNT2 108 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 SH3PXD2BA1X283 911 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 NPIPB13A6NJU9 1138 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 NPIPB4C9JG80 1138 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 GPRIN2O60269 458 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 SERPINA5P05154 406 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 ZNF35P13682 527 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 MAKP20794 623 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 PDLIM4P50479 330 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 GYS2P54840 703 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 GALK2Q01415 458 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 CD47Q08722 323 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 GKAP1Q5VSY0 366 aaPredicted RBP14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 TMEM53Q6P2H8 277 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 ZNF730Q6ZMV8 503 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 SLC16A14Q7RTX9 510 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 CYP4Z1Q86W10 505 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 RBM15BQ8NDT2 890 aaKnown RBP14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 SEPHS2Q99611 448 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 RAB1BQ9H0U4 201 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 TXNIPQ9H3M7 391 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 SPAG4Q9NPE6 437 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 EGFL7Q9UHF1 273 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 RPS6KA6Q9UK32 745 aa14.47□□□□□ -0.09
CACNA1A-259ENST00000638114 TRAV27A0A087WT01 109 aa14.46□□□□□ -0.09
CACNA1A-259ENST00000638114 TMEM129A0AVI4 362 aa14.46□□□□□ -0.09
CACNA1A-259ENST00000638114 EFCAB9A8MZ26 197 aa14.46□□□□□ -0.09
CACNA1A-259ENST00000638114 CD5LO43866 347 aa14.46□□□□□ -0.09
CACNA1A-259ENST00000638114 SLC2A10O95528 541 aa14.46□□□□□ -0.09
CACNA1A-259ENST00000638114 ERCC1P07992 297 aaPredicted RBP14.46□□□□□ -0.09
CACNA1A-259ENST00000638114 GNGT1P63211 74 aa14.46□□□□□ -0.09
CACNA1A-259ENST00000638114 PRKCDQ05655 676 aa14.46□□□□□ -0.09
CACNA1A-259ENST00000638114 LOXL1Q08397 574 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms