RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 KDM8Q8N371 416 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 DDX31Q9H8H2 851 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 GALNT9Q9HCQ5 603 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PGAP2Q9UHJ9 254 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 MUTYHQ9UIF7 546 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ADAM29Q9UKF5 820 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 SLC5A6Q9Y289 635 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 V9GYS6 101 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ATG2BQ96BY7 2078 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 MS4A18H0YCH9 400 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 GFRA2O00451 464 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 GYPBP06028 91 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 NAGAP17050 411 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ELK1P19419 428 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 IRS1P35568 1242 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF93P35789 620 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 WDR5P61964 334 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 MS4A18Q3C1V0 323 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR2A2Q6IF42 318 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 GRINAQ7Z429 371 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 CBARPQ8N350 705 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SEMA6DQ8NFY4 1073 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ESRP2Q9H6T0 727 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TXNRD2Q9NNW7 524 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 C1GALT1Q9NS00 363 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ANKRD10Q9NXR5 420 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF716A6NP11 495 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 PRSS56P0CW18 603 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 GIFP27352 417 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TAGLN2P37802 199 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 CTBSQ01459 385 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 RTP2Q5QGT7 225 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM211Q6ICI0 200 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 CLEC14AQ86T13 490 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 MOB3BQ86TA1 216 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ANKRD13BQ86YJ7 626 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SFTPA2Q8IWL1 248 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SFTPA1Q8IWL2 248 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR2AK2Q8NG84 335 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SMAP2Q8WU79 429 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SLC25A43Q8WUT9 341 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 GGHQ92820 318 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 DLL4Q9NR61 685 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM181Q9P2C4 612 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ANKRD36CQ5JPF3 1778 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TMED7-TICAM2A0A0A6YYA0 188 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ZFP92A6NM28 416 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 FAM166BA8MTA8 275 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 HCRTO43612 131 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 COX7A2P2O60397 106 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TNFSF15O95150 251 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 HMGN2P05204 90 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 DHRS4L1P0CG22 281 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR1D5P58170 312 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 CDK5Q00535 292 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 EBPQ15125 230 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM97Q5BJF2 176 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 PM20D1Q6GTS8 502 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR6V1Q8N148 313 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 FADS6Q8N9I5 356 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM163Q8TC26 289 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 DPH3Q96FX2 82 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 PEBP4Q96S96 227 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR52D1Q9H346 318 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 RAB18Q9NP72 206 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 LAMP3Q9UQV4 416 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TMED7Q9Y3B3 224 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 MIA3Q5JRA6 1907 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 LTBP3Q9NS15 1303 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 G3V3Y1 287 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ALOX12BO75342 701 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 MBP02144 154 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 CAPNS1P04632 268 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 PGGT1BP53609 377 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 MAT1AQ00266 395 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 DEFA6Q01524 100 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ACOT6Q3I5F7 207 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 LHFPL2Q6ZUX7 228 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 KMT5CQ86Y97 462 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 UBALD2Q8IYN6 164 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 DND1Q8IYX4 353 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 GABRG1Q8N1C3 465 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 C11orf42Q8N5U0 333 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 RAB6CQ9H0N0 254 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 RAB22AQ9UL26 194 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 PPP1R3CQ9UQK1 317 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 A3GALT2U3KPV4 340 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 KLK10O43240 276 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ADAM11O75078 769 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 S100A8P05109 93 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 VEZF1Q14119 521 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ADAM5Q6NVV9 412 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ENTHD1Q8IYW4 607 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 BIRC8Q96P09 236 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SLCO5A1Q9H2Y9 848 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF446Q9NWS9 450 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ETV7Q9Y603 341 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 UBR2Q8IWV8 1755 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SERINC4A6NH21 518 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR6C76A6NM76 312 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms