RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CCDC32Q9BV29 185 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 TXNL4BQ9NX01 149 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 IL20Q9NYY1 176 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 CLDN16Q9Y5I7 305 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 A0A1W2PQD3 144 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 LRRN3E7EW58 273 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 CDC42EP2O14613 210 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 PTTG1O95997 202 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 IL1AP01583 271 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 MYO7BQ6PIF6 2116 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 WDR88Q6ZMY6 472 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF620Q6ZNG0 422 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 PFN4Q8NHR9 129 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 OIT3Q8WWZ8 545 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 TXNDC15Q96J42 360 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 UBQLN3Q9H347 655 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 CCDC182A6NF36 153 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 PIP5K1CO60331 668 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF354AO60765 605 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 APOL3O95236 402 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF823P16415 610 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 PPP3R1P63098 170 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 MRPL28Q13084 256 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 ACOT12Q8WYK0 555 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 SMAD5Q99717 465 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 TMED9Q9BVK6 235 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 ANGPTL4Q9BY76 406 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 SLC25A18Q9H1K4 315 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 SRA1Q9HD15 236 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 IKZF2Q9UKS7 526 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF337Q9Y3M9 751 aa11.22□□□□□ -0.61
SYNGAP1-207ENST00000628646 ESPL1Q14674 2120 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 C12orf71A8MTZ7 269 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 SURF4O15260 269 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 AQP2P41181 271 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 ERVK-25P63136 954 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR2G6Q5TZ20 316 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 C9orf135Q5VTT2 229 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 ARIH2OSQ8N7S6 290 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR2M3Q8NG83 312 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR4K13Q8NH42 304 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 GPR119Q8TDV5 335 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 SLC25A46Q96AG3 418 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 LRRC46Q96FV0 321 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 PPP1R3DO95685 299 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 NR2C1P13056 603 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 RFX2P48378 723 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 TPBGQ13641 420 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF791Q3KP31 576 aaPredicted RBP11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 DNM1P34Q6PK57 102 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 COMMD2Q86X83 199 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 LAX1Q8IWV1 398 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR52E2Q8NGJ4 325 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR52N1Q8NH53 320 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 NEIL3Q8TAT5 605 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 SPRY4Q9C004 299 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 C12orf49Q9H741 205 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 RNF121Q9H920 327 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 ASB6Q9NWX5 421 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 EMC3Q9P0I2 261 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 COMMD3Q9UBI1 195 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 LHX6Q9UPM6 363 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 TMEM14AQ9Y6G1 99 aa11.21□□□□□ -0.61
SYNGAP1-207ENST00000628646 IQCMA0A1B0GVH7 501 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 EIF1BO60739 113 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 MRPL33O75394 65 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 IL2RAP01589 272 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 BLVRAP53004 296 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 MRPS15P82914 257 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 KLRB1Q12918 225 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 HNRNPA0Q13151 305 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 C22orf42Q6IC83 251 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 IL17RDQ8NFM7 739 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 ZNF417Q8TAU3 575 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 ROBO4Q8WZ75 1007 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 TNFRSF13CQ96RJ3 184 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 ZNF587Q96SQ5 575 aaPredicted RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 ZNF879B4DU55 563 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 IDH3BO43837 385 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 FADS1O60427 444 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 HTR2AP28223 471 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 EIF2B2P49770 351 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 SGCAQ16586 387 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 LUZP2Q86TE4 346 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 KLBQ86Z14 1044 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 HTRA1Q92743 480 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 HOXB13Q92826 284 aaPredicted RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 C3orf49Q96BT1 292 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 CNN2Q99439 309 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 RBM24Q9BX46 236 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 ERVK13-1Q9NX77 482 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 COQ3Q9NZJ6 369 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 EMC9Q9Y3B6 208 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 IER3IP1Q9Y5U9 82 aa11.21□□□□□ -0.62
SYNGAP1-207ENST00000628646 A0A1W2PPL8 197 aa11.2□□□□□ -0.62
SYNGAP1-207ENST00000628646 SHISA3A0PJX4 238 aa11.2□□□□□ -0.62
SYNGAP1-207ENST00000628646 CLEC2LP0C7M8 214 aa11.2□□□□□ -0.62
SYNGAP1-207ENST00000628646 SKP2Q13309 424 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms