RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 MMP28Q9H239 520 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 PCDHGA1Q9Y5H4 931 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 A0A087WUU8 490 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 MT-ND4P03905 459 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 ZNF806P0C7X5 589 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 MTCP1P56278 107 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 LCN6P62502 163 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 CXADRP78310 365 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 TNK1Q13470 666 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 ARIH2OSQ8N7S6 290 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 APH1AQ96BI3 265 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 BOD1Q96IK1 185 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 TXNIPQ9H3M7 391 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 OBP2BQ9NPH6 170 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 PRELID3BQ9Y3B1 194 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 TMEM82A0PJX8 343 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 A6NL46 340 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 H7C2Y5 167 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 PMS2P2O95744 297 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 CTXN2P0C2S0 81 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 RUNX2Q13950 521 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 EXOSC6Q5RKV6 272 aaKnown RBP8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 APOOLQ6UXV4 268 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 ZNF436Q9C0F3 470 aaPredicted RBP8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 MKRN2Q9H000 416 aaKnown RBP8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 PPA2Q9H2U2 334 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 GMPR2Q9P2T1 348 aaKnown RBP8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 TIMM10BQ9Y5J6 103 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 NKX6-3A6NJ46 265 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 IDSB3KWA1 339 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 GIFP27352 417 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 RFX2P48378 723 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 MAN2A2P49641 1150 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 LHFPL2Q6ZUX7 228 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 NKAIN4Q8IVV8 208 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 ETFBKMTQ8IXQ9 262 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 BEST4Q8NFU0 473 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 TSNAXQ99598 290 aaKnown RBP8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 NECAP2Q9NVZ3 263 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 EHFQ9NZC4 300 aa8.13□□□□□ -1.11
AP000542.3-201ENST00000623391 DVL2O14641 736 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SMAD9O15198 467 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SPI1P17947 270 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 TBPP20226 339 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 GDNFP39905 211 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 RAE1P78406 368 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 TOMM34Q15785 309 aaPredicted RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 NKPD1Q17RQ9 610 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 ARSJQ5FYB0 599 aaPredicted RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 PRAMEF9Q5VWM5 478 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 LYPD4Q6UWN0 246 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 CD300LDQ6UXZ3 194 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 OR9K2Q8NGE7 335 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 FCRL1Q96LA6 429 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 EIF5A2Q9GZV4 153 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 WWTR1Q9GZV5 400 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 EXOSC3Q9NQT5 275 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 A0A0A6YYH2 397 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 A6NJ64 397 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 H0Y8X5 98 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 XRCC2O43543 280 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 RGS11O94810 467 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SNU13P55769 128 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 ZIC1Q15915 447 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 MEP1BQ16820 701 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SLC22A6Q4U2R8 563 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 C12orf73Q69YU5 71 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 CFAP77Q6ZQR2 320 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 DTX3Q8N9I9 347 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 BOLLQ8N9W6 283 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 STT3BQ8TCJ2 826 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 FAM3DQ96BQ1 224 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 THOC3Q96J01 351 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 OR2A14Q96R47 310 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SPACA1Q9HBV2 294 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SDHAF2Q9NX18 166 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 LOXL2Q9Y4K0 774 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SMCO3A2RU48 225 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SLC34A2O95436 690 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 C1QAP02745 245 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 OR8U9P0C7N5 309 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 PPP3CBP16298 524 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 EIF2S3P41091 472 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 HTR2BP41595 481 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 CCR9P51686 369 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 BCL2A1Q16548 175 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 ADGRF3Q8IZF5 1079 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 SEMA6DQ8NFY4 1073 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 TMEM106AQ96A25 262 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 YIPF6Q96EC8 236 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 MFFQ9GZY8 342 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 PRDM7Q9NQW5 492 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 REV1Q9UBZ9 1251 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 RCE1Q9Y256 329 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 WDR90Q96KV7 1748 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 CCDC187A0A096LP49 1063 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 NKX2-2O95096 273 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 CNOT4O95628 575 aaKnown RBP8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 KNG1P01042 644 aa8.12□□□□□ -1.11
AP000542.3-201ENST00000623391 ZGLP1P0C6A0 271 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms