RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TIMP3P35625 211 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SELENOPP49908 381 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 CHN2P52757 468 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 CLRN1P58418 232 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 HIST3H3Q16695 136 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SLC35D3Q5M8T2 416 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 OR2A2Q6IF42 318 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 NIPAL3Q6P499 406 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 LRFN4Q6PJG9 635 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SLC25A47Q6Q0C1 308 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SEM1Q6ZVN7 128 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 ZBTB46Q86UZ6 589 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 CD163Q86VB7 1156 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 GID4Q8IVV7 300 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 C20orf196Q8IYI0 205 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 TMEM123Q8N131 208 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF786Q8N393 782 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 C9orf106Q8NAJ2 232 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 ST6GALNAC3Q8NDV1 305 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 BBS1Q8NFJ9 593 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 MBD3L2Q8NHZ7 208 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 GGHQ92820 318 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 MCHR2Q969V1 340 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 NMD3Q96D46 503 aaKnown RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 GMPPAQ96IJ6 420 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 TSSK2Q96PF2 358 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 NUAK2Q9H093 628 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SYT4Q9H2B2 425 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 TP63Q9H3D4 680 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 DUSP21Q9H596 190 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 AMBNQ9NP70 447 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 RPRD1BQ9NQG5 326 aaKnown RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 SCN3BQ9NY72 215 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 HAO2Q9NYQ3 351 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 GLTPQ9NZD2 209 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 WARS2Q9UGM6 360 aaKnown RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 PSORS1C1Q9UIG5 152 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 CLEC4AQ9UMR7 237 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 MYRFQ9Y2G1 1151 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 NOSIPQ9Y314 301 aaKnown RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 TPRKBQ9Y3C4 175 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 FAM215AQ9Y5M1 114 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 PKD1L2Q7Z442 2459 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 DSPP15924 2871 aaKnown RBP7.11□□□□□ -1.27
CPNE3-209ENST00000620393 NCKAP5O14513 1909 aa7.11□□□□□ -1.27
CPNE3-209ENST00000620393 FREM3P0C091 2139 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CCDC182A6NF36 153 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 TRIM64A6NGJ6 449 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 OR6C65A6NJZ3 312 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 SLC22A31A6NKX4 558 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 PTGES3LE9PB15 166 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 H7C1C5 153 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 SLC1A7O00341 560 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 DCTN6O00399 190 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 XPNPEP2O43895 674 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 SLC16A7O60669 478 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 FAM20BO75063 409 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 SLC43A1O75387 559 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 UPK3AO75631 287 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 SMNDC1O75940 238 aaKnown RBP eCLIP7.1□□□□□ -1.27
CPNE3-209ENST00000620393 GLCEO94923 617 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 GYPBP06028 91 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CRHP06850 196 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 QDPRP09417 244 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 GLI4P10075 376 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CLUP10909 449 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 NR2C1P13056 603 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CTLA4P16410 223 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CEACAM8P31997 349 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-209ENST00000620393 PYCR1P32322 319 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 KIR2DL2P43627 348 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-209ENST00000620393 SLC15A1P46059 708 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 MTNR1AP48039 350 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CSNK1A1P48729 337 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CENPAP49450 140 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF133P52736 654 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-209ENST00000620393 BLVRAP53004 296 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 NUDT6P53370 316 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CDH11P55287 796 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 LCN6P62502 163 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 APOFQ13790 326 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 GUSBP1Q15486 140 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 ETFDHQ16134 617 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 KLHL12Q53G59 568 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 KLHL22Q53GT1 634 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 PHYHD1Q5SRE7 291 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 RIPPLY2Q5TAB7 128 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 LINC01590Q5TEZ4 76 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CARD17Q5XLA6 110 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 B3GNT6Q6ZMB0 384 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 FAM214BQ7L5A3 538 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 NUFIP2Q7Z417 695 aaKnown RBP7.1□□□□□ -1.27
CPNE3-209ENST00000620393 OR51L1Q8NGJ5 315 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 OR9Q1Q8NGQ5 310 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 OR6N1Q8NGY5 312 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 ZNRF4Q8WWF5 429 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 IPCEF1Q8WWN9 437 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms