RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TEX19Q8NA77 164 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 OTOSQ8NHW6 89 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 PAQR8Q8TEZ7 354 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 OR5B2Q96R09 309 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 ANGPTL4Q9BY76 406 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 RPH3AQ9Y2J0 694 aaPredicted RBP15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 PCSK5Q92824 1860 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 GPRIN2O60269 458 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 ZFPL1O95159 310 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 MT-CO3P00414 261 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 SFTPDP35247 375 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 BCAP31P51572 246 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 FMODQ06828 376 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 SPEM2Q0P670 501 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 SSPNQ14714 243 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 MEP1BQ16820 701 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 SFXN4Q6P4A7 337 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 SYT9Q86SS6 491 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 TPRA1Q86W33 373 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 RGP1Q92546 391 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 GNRHR2Q96P88 292 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 MNTQ99583 582 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 SH2D2AQ9NP31 389 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 ANKRD10Q9NXR5 420 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 MALT1Q9UDY8 824 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 B3GALT5Q9Y2C3 310 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 COA3Q9Y2R0 106 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 TMEM14AQ9Y6G1 99 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 A0A1B0GTH9 108 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 A6NIZ1 184 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 GALR2O43603 387 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 UCHL1P09936 223 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 MAGEB1P43366 347 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 RAP1BP61224 184 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 RAP1AP62834 184 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 SLC22A10Q63ZE4 541 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 B3GNTL1Q67FW5 361 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 PAMR1Q6UXH9 720 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 JSRP1Q96MG2 331 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 TMEM165Q9HC07 324 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 SLCO1C1Q9NYB5 712 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 B3GAT1Q9P2W7 334 aa15.55■□□□□ 0.08
PCDHGC3-205ENST00000617641 TMCC2O75069 709 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 MPZL1O95297 269 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 SPARCP09486 303 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 SPNP16150 400 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 THBS2P35442 1172 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 OR2B6P58173 313 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 EGR3Q06889 387 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 SLC25A35Q3KQZ1 300 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 XKRXQ6PP77 449 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 MDGA2Q7Z553 956 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 ARMC10Q8N2F6 343 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 ORAI1Q96D31 301 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 MAP6Q96JE9 813 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 EMC6Q9BV81 110 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 SP140LQ9H930 580 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 B3GAT2Q9NPZ5 323 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 FRRS1LQ9P0K9 344 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 RASD1Q9Y272 281 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 ZNF281Q9Y2X9 895 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 MED12Q93074 2177 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 CCDC187A0A096LP49 1063 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 TRAV1-2A0A0B4J238 106 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 GATBO75879 557 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 HPP00738 406 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 IL7P13232 177 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 RAB3BP20337 219 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 CRABP1P29762 137 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 EIF1P41567 113 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 RPS15P62841 145 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 ADAM8P78325 824 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 SELENBP1Q13228 472 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 ALKBH1Q13686 389 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 TMEM176BQ3YBM2 270 aaPredicted RBP15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 PYDC2Q56P42 97 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 ACOT12Q8WYK0 555 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 ZBTB8AQ96BR9 441 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 KCNK17Q96T54 332 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 CDC6Q99741 560 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 TBC1D24Q9ULP9 559 aa15.54■□□□□ 0.08
PCDHGC3-205ENST00000617641 IGKV1D-43A0A0B4J1Z2 117 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 A0A1W2PNV4 684 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 NPIPB13A6NJU9 1138 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 ACOD1A6NK06 481 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 NPIPB4C9JG80 1138 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 SNPHO15079 494 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 FZD7O75084 574 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 ARL6IP5O75915 188 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 SLC2A2P11168 524 aaPredicted RBP15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 LIFP15018 202 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 DPP4P27487 766 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 ADH6P28332 368 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 EVX1P49640 407 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 BLVRAP53004 296 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 BIDP55957 195 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 DEFA1P59665 94 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 DEFA3P59666 94 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 UNQ9370/PRO34162Q6UXP9 181 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 NSMAFQ92636 917 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms