RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 LINGO2Q7L985 606 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 IZUMO1Q8IYV9 350 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 GATSQ8NAP1 163 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 PHOSPHO1Q8TCT1 267 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 PTPMT1Q8WUK0 201 aaPredicted RBP13.3□□□□□ -0.28
CDH1-213ENST00000612417 TSLPQ969D9 159 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 ORAI1Q96D31 301 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 SLC46A1Q96NT5 459 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 KLHL9Q9P2J3 617 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 RARRES3Q9UL19 164 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 SRPK3Q9UPE1 567 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 KLHDC2Q9Y2U9 406 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 ETV7Q9Y603 341 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 TMEM72A0PK05 275 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 C4orf47A7E2U8 309 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 HSPB2A8KAH6 182 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 PSMD9O00233 223 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 UTS2O95399 124 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 CRYZL1O95825 349 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 PTH2RP49190 550 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 PER3P56645 1201 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 LTBQ06643 244 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 HSPB2Q16082 182 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 LIPNQ5VXI9 398 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 APOOLQ6UXV4 268 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 RFPL4BQ6ZWI9 263 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 FCRLAQ7L513 359 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 TMEM151BQ8IW70 566 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 OR11G2Q8NGC1 345 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 OR5AK2Q8NH90 309 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 NSMAFQ92636 917 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 HAVCR1Q96D42 359 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 TSSK2Q96PF2 358 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 SLITRK2Q9H156 845 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 TSPAN10Q9H1Z9 355 aaPredicted RBP13.3□□□□□ -0.28
CDH1-213ENST00000612417 HRASLSQ9HDD0 168 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 B3GNT2Q9NY97 397 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 FRRS1LQ9P0K9 344 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 OR5V1Q9UGF6 321 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 ELF5Q9UKW6 265 aaPredicted RBP13.3□□□□□ -0.28
CDH1-213ENST00000612417 FRG2CA6NGY1 282 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 FAM171A2A8MVW0 826 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 SERPINI2O75830 405 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 KRT33AO76009 404 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 LDOC1O95751 146 aaPredicted RBP13.29□□□□□ -0.28
CDH1-213ENST00000612417 TGM6O95932 706 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 OR8G3PP0DMU2 310 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 LCN1P31025 176 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 CCR4P51679 360 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 SCAND1P57086 179 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 RPL18Q07020 188 aaKnown RBP13.29□□□□□ -0.28
CDH1-213ENST00000612417 NSDHLQ15738 373 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 GPR139Q6DWJ6 353 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 LYPD8Q6UX82 237 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 SLC51BQ86UW2 128 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 C10orf53Q8N6V4 93 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 ZNF433Q8N7K0 673 aaPredicted RBP13.29□□□□□ -0.28
CDH1-213ENST00000612417 OR11H4Q8NGC9 324 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 OR2T4Q8NH00 348 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 OR52I2Q8NH67 350 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 C15orf40Q8WUR7 153 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 MIB2Q96AX9 1013 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 S100A16Q96FQ6 103 aaKnown RBP13.29□□□□□ -0.28
CDH1-213ENST00000612417 ADAM19Q9H013 955 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 NXF5Q9H1B4 397 aaKnown RBP13.29□□□□□ -0.28
CDH1-213ENST00000612417 FKRPQ9H9S5 495 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 MKL2Q9ULH7 1088 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 FOXJ3Q9UPW0 622 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 RCE1Q9Y256 329 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 R4GN57 208 aa13.29□□□□□ -0.28
CDH1-213ENST00000612417 DCTN6O00399 190 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 CDK2AP1O14519 115 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 SCRG1O75711 98 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 ZNF432O94892 652 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 RAF1P04049 648 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 TPOP07202 933 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 PSMB1P20618 241 aaKnown RBP13.28□□□□□ -0.28
CDH1-213ENST00000612417 EGR3Q06889 387 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 CAMK2DQ13557 499 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 MESTQ5EB52 335 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 OLFML2AQ68BL7 652 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 RHBDD2Q6NTF9 364 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 SHISA6Q6ZSJ9 500 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
CDH1-213ENST00000612417 LILRB1Q8NHL6 650 aaPredicted RBP13.28□□□□□ -0.28
CDH1-213ENST00000612417 FCAMRQ8WWV6 532 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 ADAD1Q96M93 576 aaKnown RBP13.28□□□□□ -0.28
CDH1-213ENST00000612417 TSPAN32Q96QS1 320 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 OR8D2Q9GZM6 311 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 LAT2Q9GZY6 243 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 TCF7L1Q9HCS4 588 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 DLL4Q9NR61 685 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 GRHPRQ9UBQ7 328 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 CTSFQ9UBX1 484 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 SCP2D1Q9UJQ7 156 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 MRTO4Q9UKD2 239 aaKnown RBP13.28□□□□□ -0.28
CDH1-213ENST00000612417 ARPC4-TTLL3A0A0A6YYG9 625 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 A0A1B0GUH1 482 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 GMDSO60547 372 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 TIAF1O95411 115 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms