RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SF3B4Q15427 424 aaKnown RBP eCLIP13.07□□□□□ -0.32
PCDHB16-201ENST00000609684 KRBOX4Q5JUW0 171 aa13.07□□□□□ -0.32
PCDHB16-201ENST00000609684 STEAP1BQ6NZ63 245 aa13.07□□□□□ -0.32
PCDHB16-201ENST00000609684 PRSS45Q7RTY3 260 aa13.07□□□□□ -0.32
PCDHB16-201ENST00000609684 OR6M1Q8NGM8 313 aa13.07□□□□□ -0.32
PCDHB16-201ENST00000609684 ZNF286AQ9HBT8 521 aa13.07□□□□□ -0.32
PCDHB16-201ENST00000609684 A0A0A6YYD5 115 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 TSPAN11A1L157 253 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 PRAMEF27A3QJZ7 478 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 CD300LBA8K4G0 201 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 SLC2A1P11166 492 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 SPI1P17947 270 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 ENPP1P22413 925 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 PPICP45877 212 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 GFERP55789 205 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 KIAA0040Q15053 153 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 ZNF684Q5T5D7 378 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 PRAMEF9Q5VWM5 478 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 MSRB3Q8IXL7 192 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 UBE2ZQ9H832 354 aaPredicted RBP13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 OBP2BQ9NPH6 170 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 CHRNA9Q9UGM1 479 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 POM121CA8CG34 1229 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 TCN2P20062 427 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 FCRL6Q6DN72 434 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 ESX1Q8N693 406 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 OR5M1Q8NGP8 315 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 SEC22AQ96IW7 307 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 DCLRE1CQ96SD1 692 aaKnown RBP13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 SEMA4CQ9C0C4 833 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 UNKLQ9H9P5 680 aaKnown RBP13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 FBXL2Q9UKC9 423 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 BOLA1Q9Y3E2 137 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 THSD7AQ9UPZ6 1657 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 LOC100289279A0A1B0GTE1 492 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 TK1P04183 234 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 RAB5BP61020 215 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 ACTBL2Q562R1 376 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 TMEM215Q68D42 235 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 STT3BQ8TCJ2 826 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 PSMF1Q92530 271 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 SLC35B4Q969S0 331 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 OPALINQ96PE5 141 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 FOXQ1Q9C009 403 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 SLC25A19Q9HC21 320 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 CGGBP1Q9UFW8 167 aaPredicted RBP13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 SURF4O15260 269 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 PRICKLE3O43900 615 aaPredicted RBP13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 ADGRE4PQ86SQ3 457 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 STK35Q8TDR2 534 aa13.06□□□□□ -0.32
PCDHB16-201ENST00000609684 M0QYG6 137 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 ACTL6BO94805 426 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 ELK1P19419 428 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 SRP9P49458 86 aaKnown RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 RPS19BP1Q86WX3 136 aaKnown RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 CADM3Q8N126 398 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 RNF128Q8TEB7 428 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 MRGPRX3Q96LB0 322 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 CALHM2Q9HA72 323 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 SERGEFQ9UGK8 458 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 MED16Q9Y2X0 877 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 MAGEB4O15481 346 aaPredicted RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 GPR155Q7Z3F1 870 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 OR5T1Q8NG75 326 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 PAQR8Q8TEZ7 354 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 FBXO8Q9NRD0 319 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 ASCC3Q8N3C0 2202 aaKnown RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 PLSCR5A0PG75 271 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 H0YIG0 161 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 SRFP11831 508 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 SDHAP31040 664 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 DIO1P49895 249 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 CCR9P51686 369 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 ACKR1Q16570 336 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 ZNF813Q6ZN06 617 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 NKAIN3Q8N8D7 197 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 SMAP2Q8WU79 429 aaPredicted RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 SLC38A1Q9H2H9 487 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 UBBP0CG47 229 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 APOBEC1P41238 236 aaKnown RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 ERVK-16P61578 105 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 RPS18P62269 152 aaKnown RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 RAE1P78406 368 aaKnown RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 OXA1LQ15070 435 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 ALKAL2Q6UX46 152 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 GOT1L1Q8NHS2 421 aaPredicted RBP13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 OR5B12Q96R08 314 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 OR11A1Q9GZK7 315 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 COPS3Q9UNS2 423 aa13.05□□□□□ -0.32
PCDHB16-201ENST00000609684 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 SLC22A23A1A5C7 686 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 BET1O15155 118 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 TNFSF12O43508 249 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 ICOSLGO75144 302 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 AQP6Q13520 282 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms