RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 THEM4Q5T1C6 240 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 PRAMEF5Q5TYX0 476 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 PRAMEF6Q5VXH4 476 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 OR52E8Q6IFG1 317 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 HSDL2Q6YN16 418 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 PGAP1Q75T13 922 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 ZNF571Q7Z3V5 609 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 CDKL3Q8IVW4 592 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 UBE2J2Q8N2K1 259 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 DCAF4L2Q8NA75 395 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 OR4C5Q8NGB2 326 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 OR8J2Q8NGG1 315 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 OR51S1Q8NGJ8 323 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 OR5D13Q8NGL4 314 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 NEIL3Q8TAT5 605 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 UCN3Q969E3 161 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 SLC35B4Q969S0 331 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 UBE2E3Q969T4 207 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 KIAA1143Q96AT1 154 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 ELSPBP1Q96BH3 223 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 PANX1Q96RD7 426 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 TSG101Q99816 390 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 TMEM175Q9BSA9 504 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 HDHD2Q9H0R4 259 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 SLC25A22Q9H936 323 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 NHEJ1Q9H9Q4 299 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 POLE4Q9NR33 117 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 TBC1D24Q9ULP9 559 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 TMCO1Q9UM00 188 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 PACSIN2Q9UNF0 486 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 FHOD3Q2V2M9 1422 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 CHD4Q14839 1912 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 RAI1Q7Z5J4 1906 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PLEKHH1Q9ULM0 1364 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 A0A1W2PPV4 95 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 TCRBV9S1A1TA0A576 114 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 ARHGEF35A5YM69 484 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 TMEM210A6NLX4 147 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 GFYI3L273 518 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PRKAB2O43741 272 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 ZNF861PO60384 105 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 RAMP3O60896 148 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 NDUFS6O75380 124 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 ERLIN2O94905 339 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PLEKP08567 350 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 NCK1P16333 377 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 TCN1P20061 433 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 CXCR2P25025 360 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 HOXA9P31269 272 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 CRATP43155 626 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 KIR2DS4P43632 304 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 KPNA2P52292 529 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 NUP107P57740 925 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PRPS1P60891 318 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 YWHAGP61981 247 aaKnown RBP eCLIP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 RPS15P62841 145 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 VGLL4Q14135 290 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 RCAN2Q14206 197 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 OXA1LQ15070 435 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 DUSP7Q16829 419 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 MICBQ29980 383 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 KLHL38Q2WGJ6 581 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PARP15Q460N3 678 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 CARD16Q5EG05 197 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PAGE3Q5JUK9 113 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PDZK1Q5T2W1 519 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 OR2G6Q5TZ20 316 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 SPECC1LQ69YQ0 1117 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 TIGD3Q6B0B8 471 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 TMIGD1Q6UXZ0 262 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 RNF165Q6ZSG1 346 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 SCD5Q86SK9 330 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 RDH10Q8IZV5 341 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 FAM58AQ8N1B3 248 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 C6orf223Q8N319 242 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 GTPBP8Q8N3Z3 284 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 NKAPP1Q8N9T2 125 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 GATSQ8NAP1 163 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 C20orf203Q8NBC4 194 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 OR7G1Q8NGA0 311 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 GPX8Q8TED1 209 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 SCFD1Q8WVM8 642 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 CACNG8Q8WXS5 425 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 MRGPRFQ96AM1 343 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 RPUSD4Q96CM3 377 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 CXorf40BQ96DE9 158 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 TIMD4Q96H15 378 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 ZNF317Q96PQ6 595 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 ALS2CR12Q96Q35 445 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 TGS1Q96RS0 853 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 MRPL45Q9BRJ2 306 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 NAT9Q9BTE0 207 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 CHRDL1Q9BU40 450 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PARD6BQ9BYG5 372 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 NTN4Q9HB63 628 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 MRPS30Q9NP92 439 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 THUMPD1Q9NXG2 353 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PISDQ9UG56 409 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 ADAM28Q9UKQ2 775 aa2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 RHBDD3Q9Y3P4 386 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms