RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 B9D1Q9UPM9 204 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 ANKRD11Q6UB99 2663 aaPredicted RBP20.08■□□□□ 0.8
IRF3-228ENST00000601291 IGKV3D-15A0A087WSY6 115 aa20.07■□□□□ 0.8
IRF3-228ENST00000601291 SLC22A20A6NK97 555 aa20.07■□□□□ 0.8
IRF3-228ENST00000601291 DCTN6O00399 190 aa20.07■□□□□ 0.8
IRF3-228ENST00000601291 WISP2O76076 250 aa20.07■□□□□ 0.8
IRF3-228ENST00000601291 CTLA4P16410 223 aa20.07■□□□□ 0.8
IRF3-228ENST00000601291 TBCEQ15813 527 aaPredicted RBP20.07■□□□□ 0.8
IRF3-228ENST00000601291 LINC01590Q5TEZ4 76 aa20.07■□□□□ 0.8
IRF3-228ENST00000601291 WDFY1Q8IWB7 410 aa20.07■□□□□ 0.8
IRF3-228ENST00000601291 ADGRL4Q9HBW9 690 aa20.07■□□□□ 0.8
IRF3-228ENST00000601291 EXOSC1Q9Y3B2 195 aaKnown RBP20.07■□□□□ 0.8
IRF3-228ENST00000601291 FAM171A2A8MVW0 826 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 AQP8O94778 261 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 TFAP2AP05549 437 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 MRPL3P09001 348 aaKnown RBP20.06■□□□□ 0.8
IRF3-228ENST00000601291 SBK2P0C263 348 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 SFTPCP11686 197 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 CSNK1A1P48729 337 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 EMX1Q04741 257 aaPredicted RBP20.06■□□□□ 0.8
IRF3-228ENST00000601291 GLO1Q04760 184 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 NEDD8Q15843 81 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 RNLSQ5VYX0 342 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 OR6N1Q8NGY5 312 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 ZNRF4Q8WWF5 429 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 TMEM45BQ96B21 275 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 INTS12Q96CB8 462 aaKnown RBP20.06■□□□□ 0.8
IRF3-228ENST00000601291 SLC25A18Q9H1K4 315 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 RNF122Q9H9V4 155 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 ERGIC3Q9Y282 383 aa20.06■□□□□ 0.8
IRF3-228ENST00000601291 IGLV1-36A0A0B4J1U3 117 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 KHDRBS3O75525 346 aaKnown RBP20.05■□□□□ 0.8
IRF3-228ENST00000601291 ACTC1P68032 377 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 ACTA1P68133 377 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 FMODQ06828 376 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 KLRB1Q12918 225 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 SF3B4Q15427 424 aaKnown RBP eCLIP20.05■□□□□ 0.81e-6■■■■■ 30.8
IRF3-228ENST00000601291 ZNF324BQ6AW86 544 aaPredicted RBP20.05■□□□□ 0.8
IRF3-228ENST00000601291 AAED1Q7RTV5 226 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 P4HA3Q7Z4N8 544 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 TMEM123Q8N131 208 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 CISD2Q8N5K1 135 aaKnown RBP20.05■□□□□ 0.8
IRF3-228ENST00000601291 FAR1Q8WVX9 515 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 FCGR1BQ92637 280 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 JAM3Q9BX67 310 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 ACOT13Q9NPJ3 140 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 BATF3Q9NR55 127 aa20.05■□□□□ 0.8
IRF3-228ENST00000601291 ZNF724A8MTY0 619 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 MYL12BO14950 172 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 SLC43A1O75387 559 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 ZNF432O94892 652 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 IGHA1P01876 353 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 HLA-DQA2P01906 255 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 PCMT1P22061 227 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 MAP2K4P45985 399 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 IRF3Q14653 427 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 HIST3H3Q16695 136 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 ZNF775Q96BV0 537 aaPredicted RBP20.04■□□□□ 0.8
IRF3-228ENST00000601291 BCO1Q9HAY6 547 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 INPP5EQ9NRR6 644 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 GLTPQ9NZD2 209 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 ING1Q9UK53 422 aaPredicted RBP20.04■□□□□ 0.8
IRF3-228ENST00000601291 NOSIPQ9Y314 301 aaKnown RBP20.04■□□□□ 0.8
IRF3-228ENST00000601291 AHRRA9YTQ3 701 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 PTGS2P35354 604 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 NAA10P41227 235 aaPredicted RBP20.04■□□□□ 0.8
IRF3-228ENST00000601291 SELENOPP49908 381 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 XAF1Q6GPH4 301 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 PLXDC2Q6UX71 529 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 ADGRE4PQ86SQ3 457 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 ACBD7Q8N6N7 88 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 OR10H4Q8NGA5 316 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 OR5M9Q8NGP3 310 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 RORBQ92753 470 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 TMEM54Q969K7 222 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 NMD3Q96D46 503 aaKnown RBP20.04■□□□□ 0.8
IRF3-228ENST00000601291 TRIB1Q96RU8 372 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 MND1Q9BWT6 205 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 GP6Q9HCN6 339 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 PARPBPQ9NWS1 579 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 TAS2R16Q9NYV7 291 aa20.04■□□□□ 0.8
IRF3-228ENST00000601291 COA3Q9Y2R0 106 aaPredicted RBP20.04■□□□□ 0.8
IRF3-228ENST00000601291 LAMA5O15230 3695 aa20.03■□□□□ 0.8
IRF3-228ENST00000601291 ZNF407Q9C0G0 2248 aa20.03■□□□□ 0.8
IRF3-228ENST00000601291 C12orf71A8MTZ7 269 aa20.03■□□□□ 0.8
IRF3-228ENST00000601291 J3QRE1 110 aa20.03■□□□□ 0.8
IRF3-228ENST00000601291 ADRA2AP08913 450 aa20.03■□□□□ 0.8
IRF3-228ENST00000601291 JUNBP17275 347 aaPredicted RBP20.03■□□□□ 0.8
IRF3-228ENST00000601291 ERI1Q8IV48 349 aaKnown RBP20.03■□□□□ 0.8
IRF3-228ENST00000601291 ZNF511Q8NB15 262 aa20.03■□□□□ 0.8
IRF3-228ENST00000601291 MCHR2Q969V1 340 aa20.03■□□□□ 0.8
IRF3-228ENST00000601291 CLCF1Q9UBD9 225 aa20.03■□□□□ 0.8
IRF3-228ENST00000601291 MGAQ8IWI9 3026 aa20.02■□□□□ 0.8
IRF3-228ENST00000601291 DAPL1A0PJW8 107 aa20.02■□□□□ 0.8
IRF3-228ENST00000601291 SELENOFO60613 162 aa20.02■□□□□ 0.8
IRF3-228ENST00000601291 MRPL33O75394 65 aaKnown RBP20.02■□□□□ 0.8
IRF3-228ENST00000601291 YES1P07947 543 aa20.02■□□□□ 0.8
IRF3-228ENST00000601291 QDPRP09417 244 aa20.02■□□□□ 0.8
IRF3-228ENST00000601291 ALDH3B2P48448 385 aa20.02■□□□□ 0.8
IRF3-228ENST00000601291 ETFDHQ16134 617 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms