RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 OR4E1P0C645 316 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR8G3PP0DMU2 310 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 AKR1C4P17516 323 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 RAB6AP20340 208 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 RABIFP47224 123 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 HOXA1P49639 335 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 GSK3AP49840 483 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ERVFC1P60507 584 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GABREP78334 506 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 DHODHQ02127 395 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 EIF2B1Q14232 305 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 ELOCQ15369 112 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 LINC00303Q3SY05 128 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 RNF212Q495C1 297 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 VWA2Q5GFL6 755 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PDSS1Q5T2R2 415 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 C3orf33Q6P1S2 294 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TMEM81Q6P7N7 255 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CORO6Q6QEF8 472 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PRSS45Q7RTY3 260 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GALNT16Q8N428 558 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR51S1Q8NGJ8 323 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR8K3Q8NH51 312 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PFN4Q8NHR9 129 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 KCNG3Q8TAE7 436 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PHOSPHO2Q8TCD6 241 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MAFIPQ8WZ33 124 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC39A7Q92504 469 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 HOXB13Q92826 284 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 PPP1R14AQ96A00 147 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC25A36Q96CQ1 311 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PELI1Q96FA3 418 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 LCORQ96JN0 433 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC6A18Q96N87 628 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 NECTIN4Q96NY8 510 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC6A7Q99884 636 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MICU1Q9BPX6 476 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 LINC00597Q9H2U6 94 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 FKRPQ9H9S5 495 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MCCC2Q9HCC0 563 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ZFP64Q9NPA5 681 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 C1orf123Q9NWV4 160 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 THAP10Q9P2Z0 257 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 TMEM72A0PK05 275 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PRSS38A1L453 326 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF264O43296 627 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SYT7O43581 403 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SUSD5O60279 629 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FADS1O60427 444 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 EIF4E2O60573 245 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 SCGB1D2O95969 90 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 IGF2P01344 180 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 IFNA1P01562 189 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 STATHP02808 62 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CSTBP04080 98 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 GLULP15104 373 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 HIST1H1CP16403 213 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 PSMB6P28072 239 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CHATP28329 748 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 BDKRB2P30411 391 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 LSSP48449 732 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 LUMP51884 338 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 SSTP61278 116 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 EEF1A1P68104 462 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 SRPXP78539 464 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 HSD11B2P80365 405 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ID2Q02363 134 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 IKZF1Q13422 519 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 RUNX3Q13761 415 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 NFATC4Q14934 902 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 TOMM34Q15785 309 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 LIPNQ5VXI9 398 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR5M10Q6IEU7 315 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 C11orf87Q6NUJ2 197 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OPN5Q6U736 354 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.23□□□□□ -1.89
VMP1-216ENST00000592790 TSEN54Q7Z6J9 526 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 LYG2Q86SG7 212 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MMP21Q8N119 569 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 KCNRGQ8N5I3 272 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 EIF4E3Q8N5X7 224 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 RCBTB1Q8NDN9 531 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 VN1R2Q8NFZ6 395 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR7G2Q8NG99 324 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR4C16Q8NGL9 310 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FNDC9Q8TBE3 224 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 APOBEC4Q8WW27 367 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 TRIM43Q96BQ3 446 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 DDIT4LQ96D03 193 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SAT2Q96F10 170 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 COX14Q96I36 57 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 DERL3Q96Q80 235 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GAL3ST4Q96RP7 486 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 NMNAT3Q96T66 252 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SARGQ9BW04 601 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLC6A17Q9H1V8 727 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 AUNIPQ9H7T9 357 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ELOVL3Q9HB03 270 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 KCNJ16Q9NPI9 418 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLAMF7Q9NQ25 335 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms