RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PGA4P0DJD7 388 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 PGA3P0DJD8 388 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 RBM34P42696 430 aaKnown RBP16.21■□□□□ 0.19
CCDC43-205ENST00000592333 MTPNP58546 118 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 NFYCQ13952 458 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 VMACQ2NL98 169 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 SLC36A2Q495M3 483 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 TTMPQ5BVD1 217 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 ELFN2Q5R3F8 820 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 LRFN4Q6PJG9 635 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 WDR88Q6ZMY6 472 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 ZNF584Q8IVC4 421 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 WDFY1Q8IWB7 410 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 OR1J2Q8NGS2 313 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 SNX18Q96RF0 628 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 SEPHS2Q99611 448 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 SLC7A7Q9UM01 511 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 HTR3EA5X5Y0 456 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 SERPINI2O75830 405 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 TFP02787 698 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 OPN1SWP03999 348 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 GZMMP51124 257 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 CYLC2Q14093 348 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-205ENST00000592333 RAB39AQ14964 217 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 MOGQ16653 247 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 MSMPQ1L6U9 139 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 COQ5Q5HYK3 327 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 TMEM53Q6P2H8 277 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 LIPHQ8WWY8 451 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 TAMM41Q96BW9 452 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 C19orf24Q9BVV8 132 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 ZNF416Q9BWM5 594 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 RACGAP1Q9H0H5 632 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 BAG5Q9UL15 447 aa16.2■□□□□ 0.18
CCDC43-205ENST00000592333 NPIPB13A6NJU9 1138 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 NPIPB4C9JG80 1138 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 MT-ND1P03886 318 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 ZNF250P15622 560 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 IL2RGP31785 369 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 RAD52P43351 418 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 GPR6P46095 362 aaPredicted RBP16.19■□□□□ 0.18
CCDC43-205ENST00000592333 ZNF133P52736 654 aaPredicted RBP16.19■□□□□ 0.18
CCDC43-205ENST00000592333 SCGB2A2Q13296 93 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 SELPLGQ14242 412 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 PCGF3Q3KNV8 242 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 RGS7BPQ6MZT1 257 aaPredicted RBP16.19■□□□□ 0.18
CCDC43-205ENST00000592333 DEF8Q6ZN54 512 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 NANOGNBQ7Z5D8 188 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 SLC30A7Q8NEW0 376 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 OR4D11Q8NGI4 311 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 OR10A6Q8NH74 314 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 MRPL13Q9BYD1 178 aaKnown RBP16.19■□□□□ 0.18
CCDC43-205ENST00000592333 BCL2L14Q9BZR8 327 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 LRMDAQ9H2I8 198 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 TPK1Q9H3S4 243 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 VIPAS39Q9H9C1 493 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 SLCO1C1Q9NYB5 712 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 NKIRAS2Q9NYR9 191 aa16.19■□□□□ 0.18
CCDC43-205ENST00000592333 IGLV3-9A0A075B6K5 115 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 A0A0A6YYJ9 748 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 A0A1W2PRG6 482 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 TCF21O43680 179 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 EDF1O60869 148 aaKnown RBP16.18■□□□□ 0.18
CCDC43-205ENST00000592333 IFNA14P01570 189 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 QDPRP09417 244 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 THRBP10828 461 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 NR2C1P13056 603 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 DAP3P51398 398 aaKnown RBP16.18■□□□□ 0.18
CCDC43-205ENST00000592333 ZNF84P51523 738 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 ERICH5Q6P6B1 374 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 IL17RELQ6ZVW7 336 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 RBM45Q8IUH3 476 aaKnown RBP16.18■□□□□ 0.18
CCDC43-205ENST00000592333 C1orf174Q8IYL3 243 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 LRRC17Q8N6Y2 441 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 OR8J3Q8NGG0 315 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 VANGL1Q8TAA9 524 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-205ENST00000592333 ZNF519Q8TB69 540 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 SYT3Q9BQG1 590 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 PRSS27Q9BQR3 290 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 SMURF2Q9HAU4 748 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 MEPEQ9NQ76 525 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-205ENST00000592333 DUSP13Q9UII6 198 aa16.18■□□□□ 0.18
CCDC43-205ENST00000592333 IQCMA0A1B0GVH7 501 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 GMNCA6NCL1 334 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 OR5F1O95221 314 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 HPXP02790 462 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 TSPAN19P0C672 248 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 UMPSP11172 480 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 CLRN1P58418 232 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 PLP2Q04941 152 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 TRIP10Q15642 601 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 TBC1D28Q2M2D7 210 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 C10orf128Q5T292 105 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 NANOGP8Q6NSW7 305 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 UNQ6126/PRO20091Q6UXV3 157 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 SLC16A14Q7RTX9 510 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 GLCCI1Q86VQ1 547 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 TEX29Q8N6K0 151 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 C11orf40Q8WZ69 217 aa16.17■□□□□ 0.18
CCDC43-205ENST00000592333 MCHR2Q969V1 340 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms