RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 NSMAFQ92636 917 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 WNT2BQ93097 391 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 ZMYND19Q96E35 227 aaPredicted RBP12.86□□□□□ -0.35
NPC1-207ENST00000588867 FOXN4Q96NZ1 517 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 ALG12Q9BV10 488 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 CCDC90BQ9GZT6 254 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 BCO1Q9HAY6 547 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 PAK1IP1Q9NWT1 392 aaPredicted RBP12.86□□□□□ -0.35
NPC1-207ENST00000588867 WARS2Q9UGM6 360 aaKnown RBP12.86□□□□□ -0.35
NPC1-207ENST00000588867 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 CCDC182A6NF36 153 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 ZNF724A8MTY0 619 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 AHCYL1O43865 530 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 SLC43A1O75387 559 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 QDPRP09417 244 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 EDN3P14138 238 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 CRABP1P29762 137 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 GSTT1P30711 240 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 KCTD21Q4G0X4 260 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 THEM4Q5T1C6 240 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 SHFQ7M4L6 423 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 GCNT2Q8N0V5 402 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 STX19Q8N4C7 294 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 OR51G2Q8NGK0 314 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 ZNF696Q9H7X3 374 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 PARPBPQ9NWS1 579 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 GLTPQ9NZD2 209 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 ERVK-18Q9QC07 812 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 RCE1Q9Y256 329 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 FKBP7Q9Y680 259 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 CACNA1BQ00975 2339 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 BSNQ9UPA5 3926 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 MED12LQ86YW9 2145 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 SPENQ96T58 3664 aaKnown RBP12.85□□□□□ -0.35
NPC1-207ENST00000588867 EFCAB10A6NFE3 127 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 SLC19A2O60779 497 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 GLCEO94923 617 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 GPANK1O95872 356 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 HLA-DQA2P01906 255 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 STSP08842 583 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 MRPL3P09001 348 aaKnown RBP12.85□□□□□ -0.35
NPC1-207ENST00000588867 SLC35A2P78381 396 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 RBPJQ06330 500 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 ST3GAL4Q11206 333 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 KLHL22Q53GT1 634 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 SLC35D3Q5M8T2 416 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 NSUN5P2Q63ZY6 315 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 DNM1P34Q6PK57 102 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 TMEM123Q8N131 208 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 C9orf106Q8NAJ2 232 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 TSPAN14Q8NG11 270 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 IPCEF1Q8WWN9 437 aaPredicted RBP12.85□□□□□ -0.35
NPC1-207ENST00000588867 MYDGFQ969H8 173 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 MCHR2Q969V1 340 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 TMEM45BQ96B21 275 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 INTS12Q96CB8 462 aaKnown RBP12.85□□□□□ -0.35
NPC1-207ENST00000588867 LGALS12Q96DT0 336 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 GMPPAQ96IJ6 420 aaPredicted RBP12.85□□□□□ -0.35
NPC1-207ENST00000588867 DUSP21Q9H596 190 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 MOKQ9UQ07 419 aa12.85□□□□□ -0.35
NPC1-207ENST00000588867 COA3Q9Y2R0 106 aaPredicted RBP12.85□□□□□ -0.35
NPC1-207ENST00000588867 IGKV1D-43A0A0B4J1Z2 117 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 IGHV3-9P01782 118 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 SPTA1P02549 2419 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 PTGER4P35408 488 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 SLC15A1P46059 708 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 MVKQ03426 396 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 PHYHD1Q5SRE7 291 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 C1orf185Q5T7R7 199 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 LCN1P1Q5VSP4 162 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 RTL6Q6ICC9 239 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 LRFN4Q6PJG9 635 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 LYPD4Q6UWN0 246 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 NUFIP2Q7Z417 695 aaKnown RBP12.84□□□□□ -0.35
NPC1-207ENST00000588867 ZBTB46Q86UZ6 589 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 GPR137CQ8N3F9 429 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 ZNF511Q8NB15 262 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 OR4F15Q8NGB8 312 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 FNDC8Q8TC99 324 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 KISS1RQ969F8 398 aaPredicted RBP12.84□□□□□ -0.35
NPC1-207ENST00000588867 TMEM54Q969K7 222 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 TM9SF2Q99805 663 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 C12orf49Q9H741 205 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 GLRX2Q9NS18 164 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 CNOT2Q9NZN8 540 aaKnown RBP12.84□□□□□ -0.35
NPC1-207ENST00000588867 SH3BGRL2Q9UJC5 107 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 USP24Q9UPU5 2620 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 TVP23AA6NH52 213 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 CD8B2A6NJW9 211 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 CENPBD1B2RD01 187 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 RGS10O43665 173 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 KHDRBS3O75525 346 aaKnown RBP12.84□□□□□ -0.35
NPC1-207ENST00000588867 UPK3AO75631 287 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 KRT33AO76009 404 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 NR2C1P13056 603 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 ATP6V1B1P15313 513 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 C21orf33P30042 268 aaPredicted RBP12.84□□□□□ -0.35
NPC1-207ENST00000588867 AGTR1P30556 359 aa12.84□□□□□ -0.35
NPC1-207ENST00000588867 PER3P56645 1201 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms