RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 NCALDP61601 193 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 HNRNPA0Q13151 305 aaKnown RBP13.74□□□□□ -0.21
SREBF1-221ENST00000583080 MELKQ14680 651 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 TSTQ16762 297 aaKnown RBP13.74□□□□□ -0.21
SREBF1-221ENST00000583080 PCGF3Q3KNV8 242 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 GCNT6Q5T4J0 391 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 PIWIL3Q7Z3Z3 882 aaKnown RBP13.74□□□□□ -0.21
SREBF1-221ENST00000583080 MSRB3Q8IXL7 192 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 ICA1LQ8NDH6 482 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 OR52B2Q96RD2 323 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 CDH20Q9HBT6 801 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 KCNK9Q9NPC2 374 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 GLTPQ9NZD2 209 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 CLDN25C9JDP6 229 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 SNNO75324 88 aaPredicted RBP13.73□□□□□ -0.21
SREBF1-221ENST00000583080 ADORA3P0DMS8 318 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 OR8G3PP0DMU2 310 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 MAKP20794 623 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 RAD52P43351 418 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 TMEM255AQ5JRV8 349 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 LRFN4Q6PJG9 635 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 SLC35D2Q76EJ3 337 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 ANKRD42Q8N9B4 389 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 OR4K5Q8NGD3 323 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 DVL3Q92997 716 aaPredicted RBP13.73□□□□□ -0.21
SREBF1-221ENST00000583080 DUX5Q96PT3 197 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 CENPHQ9H3R5 247 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 RAD21L1Q9H4I0 556 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 C7orf69Q9H7B7 122 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 ZNF696Q9H7X3 374 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 SAP30LQ9HAJ7 183 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 TMEM27Q9HBJ8 222 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 TCF7L2Q9NQB0 619 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 SLCO1C1Q9NYB5 712 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 NKIRAS2Q9NYR9 191 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 SELENONQ9NZV5 590 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 GPR160Q9UJ42 338 aa13.73□□□□□ -0.21
SREBF1-221ENST00000583080 TGP01266 2768 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 SLC22A23A1A5C7 686 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 TPD52L2O43399 206 aaKnown RBP13.72□□□□□ -0.21
SREBF1-221ENST00000583080 HKR1P10072 659 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 AQP1P29972 269 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 WDR4P57081 412 aaKnown RBP13.72□□□□□ -0.21
SREBF1-221ENST00000583080 SELENOVP59797 346 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 LCN2P80188 198 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 CDK6Q00534 326 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 MMEL1Q495T6 779 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 TNFAIP8L3Q5GJ75 292 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 SHISA2Q6UWI4 295 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 SIGLECL1Q8N7X8 197 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 OR6X1Q8NH79 312 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 ZNF519Q8TB69 540 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 GAL3ST1Q99999 423 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 TMEM43Q9BTV4 400 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 DECR2Q9NUI1 292 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 THAP1Q9NVV9 213 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 SLAMF8Q9P0V8 285 aa13.72□□□□□ -0.21
SREBF1-221ENST00000583080 UBDO15205 165 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 DHHO43323 396 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 SNAP29O95721 258 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 MT-ATP6P00846 226 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 PGA4P0DJD7 388 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 PGA3P0DJD8 388 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 TEKQ02763 1124 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 TBC1D28Q2M2D7 210 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 PDLIM3Q53GG5 364 aaPredicted RBP13.71□□□□□ -0.21
SREBF1-221ENST00000583080 HHATQ5VTY9 493 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 REEP3Q6NUK4 255 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 TMEM53Q6P2H8 277 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 MREGQ8N565 214 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 GOLGA6L1Q8N7Z2 621 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 C11orf40Q8WZ69 217 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 ZNF566Q969W8 418 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 TIMD4Q96H15 378 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 IKZF5Q9H5V7 419 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 RNF121Q9H920 327 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 DDX28Q9NUL7 540 aaKnown RBP13.71□□□□□ -0.21
SREBF1-221ENST00000583080 TAS2R5Q9NYW4 299 aa13.71□□□□□ -0.21
SREBF1-221ENST00000583080 ISPDA4D126 451 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 DNAJC9-AS1A6NH13 148 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 M0R3H8 397 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 MFN2O95140 757 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 FARS2O95363 451 aaKnown RBP13.7□□□□□ -0.22
SREBF1-221ENST00000583080 IGHV1-46P01743 117 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 RBMXP38159 391 aaKnown RBP13.7□□□□□ -0.22
SREBF1-221ENST00000583080 UCP2P55851 309 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 DEFA6Q01524 100 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 FOXL1Q12952 345 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 ZNF74Q16587 644 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 TUSC1Q2TAM9 212 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 HFEQ30201 348 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 CEP85LQ5SZL2 805 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 SPATA46Q5T0L3 261 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 SWT1Q5T5J6 900 aaKnown RBP13.7□□□□□ -0.22
SREBF1-221ENST00000583080 SLC16A14Q7RTX9 510 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 KRT73Q86Y46 540 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 LRRC17Q8N6Y2 441 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 CCL17Q92583 94 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 RAB1CQ92928 201 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms