RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ALG12Q9BV10 488 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 GRIP2Q9C0E4 1043 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 SYT4Q9H2B2 425 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 PIGMQ9H3S5 423 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 CMC2Q9NRP2 79 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 PLSCR4Q9NRQ2 329 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 FAM118AQ9NWS6 357 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 IMPAD1Q9NX62 359 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 GLTPQ9NZD2 209 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 KLHL21Q9UJP4 597 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 GPR52Q9Y2T5 361 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 FASNP49327 2511 aaKnown RBP10.72□□□□□ -0.69
IFT20-207ENST00000578547 TENM4Q6N022 2769 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 SLC22A23A1A5C7 686 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 CLEC18AA5D8T8 446 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 WIPF3A6NGB9 483 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 OR6C65A6NJZ3 312 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 FAM183AA6NL82 134 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 ZNF587BE7ETH6 402 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 PRKYO43930 277 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 QDPRP09417 244 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 ZNF3P17036 446 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 GGT2P36268 569 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 CAPGP40121 348 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 CDC42P60953 191 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 C6orf52Q5T4I8 152 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 FBXW9Q5XUX1 488 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 CLEC18BQ6UXF7 455 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 LINGO2Q7L985 606 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 MRGPRGQ86SM5 289 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 DHRSXQ8N5I4 330 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 CLEC18CQ8NCF0 446 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 OR9Q1Q8NGQ5 310 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 ITLN2Q8WWU7 325 aaPredicted RBP10.71□□□□□ -0.69
IFT20-207ENST00000578547 NSMAFQ92636 917 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 TMEM54Q969K7 222 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 TSSK2Q96PF2 358 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 RBP7Q96R05 134 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 ADI1Q9BV57 179 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 MRPL13Q9BYD1 178 aaKnown RBP10.71□□□□□ -0.69
IFT20-207ENST00000578547 MED20Q9H944 212 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 GPR35Q9HC97 309 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 RPRD1BQ9NQG5 326 aaKnown RBP10.71□□□□□ -0.69
IFT20-207ENST00000578547 ASB6Q9NWX5 421 aa10.71□□□□□ -0.69
IFT20-207ENST00000578547 FOXD3Q9UJU5 478 aaPredicted RBP10.71□□□□□ -0.69
IFT20-207ENST00000578547 GCN1Q92616 2671 aaKnown RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 LOC100130705A0A1B0GUX0 176 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 NKX2-6A6NCS4 301 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 OR6C68A6NDL8 312 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 MSTNO14793 375 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 SLC16A7O60669 478 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 SEC14L2O76054 403 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 CLIC3O95833 236 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 NR2C1P13056 603 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 PAICSP22234 425 aaKnown RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 CENPAP49450 140 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 PCYT1AP49585 367 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 FOXG1P55316 489 aaPredicted RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 CEACAM16Q2WEN9 425 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 SLC25A35Q3KQZ1 300 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 ZNF362Q5T0B9 420 aaPredicted RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 PLBD1Q6P4A8 553 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 Q6ZT83 130 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 BEND4Q6ZU67 534 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 ABHD12BQ7Z5M8 362 aaPredicted RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 FAM26EQ8N5C1 309 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 TCEANCQ8N8B7 351 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 NPEPL1Q8NDH3 523 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 LILRB4Q8NHJ6 448 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 MCHR2Q969V1 340 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 ZNF837Q96EG3 531 aaPredicted RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 HRASLS5Q96KN8 279 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 LRR1Q96L50 414 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 FOXN4Q96NZ1 517 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 IL4I1Q96RQ9 567 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 PITX2Q99697 317 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 RBM24Q9BX46 236 aaKnown RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 LINC00470Q9BZP3 86 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 NUAK2Q9H093 628 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 CRLF2Q9HC73 371 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 SRA1Q9HD15 236 aaKnown RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 VSX1Q9NZR4 365 aaPredicted RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 MALT1Q9UDY8 824 aa10.7□□□□□ -0.7
IFT20-207ENST00000578547 NDRG4Q9ULP0 352 aaKnown RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 NCOA6Q14686 2063 aaPredicted RBP10.7□□□□□ -0.7
IFT20-207ENST00000578547 INTS1Q8N201 2190 aaKnown RBP10.69□□□□□ -0.7
IFT20-207ENST00000578547 IGKV1D-43A0A0B4J1Z2 117 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 A0A1W2PPL8 197 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 FAM171A2A8MVW0 826 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 CENPBD1B2RD01 187 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 PRR23D1E9PI22 279 aaPredicted RBP10.69□□□□□ -0.7
IFT20-207ENST00000578547 H0YJX3 145 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 DHHO43323 396 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 TLX2O43763 284 aaPredicted RBP10.69□□□□□ -0.7
IFT20-207ENST00000578547 LYZL6O75951 148 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 GYPBP06028 91 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 PRR23D2P0DMB1 279 aaPredicted RBP10.69□□□□□ -0.7
IFT20-207ENST00000578547 CLUP10909 449 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 CTLA4P16410 223 aa10.69□□□□□ -0.7
IFT20-207ENST00000578547 PYCR1P32322 319 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms