RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 AKAP9Q99996 3911 aa16.84■□□□□ 0.29
SS18-208ENST00000577751 PRRC2AP48634 2157 aaKnown RBP16.84■□□□□ 0.29
SS18-208ENST00000577751 DNAJC8O75937 253 aaPredicted RBP16.83■□□□□ 0.28
SS18-208ENST00000577751 KRT36O76013 467 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 DANCRP0C864 163 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 B4GALT1P15291 398 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 CHRNB3Q05901 458 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 FAM98BQ52LJ0 330 aaKnown RBP16.83■□□□□ 0.28
SS18-208ENST00000577751 C10orf128Q5T292 105 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 SLC22A25Q6T423 547 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 SYT14Q8NB59 555 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 ZNF519Q8TB69 540 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 LRGUKQ96M69 825 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 TSPAN32Q96QS1 320 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 SMURF2Q9HAU4 748 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 ZNF224Q9NZL3 707 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 LYVE1Q9Y5Y7 322 aa16.83■□□□□ 0.28
SS18-208ENST00000577751 AQP12BA6NM10 295 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 GSC2O15499 205 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 TMCC2O75069 709 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 NDUFB2O95178 105 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 STAMBPO95630 424 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 CD14P08571 375 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 ARR3P36575 388 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 FXYD6P3P58550 94 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 MYBPC1Q00872 1141 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 TOP3AQ13472 1001 aaPredicted RBP16.82■□□□□ 0.28
SS18-208ENST00000577751 PGGHGQ32M88 737 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 NRN1LQ496H8 165 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 FAM205BPQ63HN1 556 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 C1orf94Q6P1W5 598 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 FAM122BQ7Z309 247 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 AQP12AQ8IXF9 295 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 DEPDC4Q8N2C3 294 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 SLC22A24Q8N4F4 322 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 ARIH2OSQ8N7S6 290 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 SMAP2Q8WU79 429 aaPredicted RBP16.82■□□□□ 0.28
SS18-208ENST00000577751 RSRC1Q96IZ7 334 aaKnown RBP16.82■□□□□ 0.28
SS18-208ENST00000577751 ZNF75AQ96N20 296 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 GPX7Q96SL4 187 aaPredicted RBP16.82■□□□□ 0.28
SS18-208ENST00000577751 ALG12Q9BV10 488 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 KATNB1Q9BVA0 655 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 CADM1Q9BY67 442 aaKnown RBP16.82■□□□□ 0.28
SS18-208ENST00000577751 TRIM15Q9C019 465 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 TMEM38BQ9NVV0 291 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 AURKCQ9UQB9 309 aa16.82■□□□□ 0.28
SS18-208ENST00000577751 E7EQL1 145 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 ATP5HO75947 161 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 HLA-HP01893 362 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 SOD3P08294 240 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 CECR9P0C854 216 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 RAP2AP10114 183 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 RPL4P36578 427 aaKnown RBP16.81■□□□□ 0.28
SS18-208ENST00000577751 ACVR1BP36896 505 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 CDH11P55287 796 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 ERVK-25P63136 954 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 B3GLCTQ6Y288 498 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 THSD4Q6ZMP0 1018 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 MDP1Q86V88 176 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 SKA3Q8IX90 412 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 ADGRG5Q8IZF4 528 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 LRRC75A-AS1Q8N1F1 130 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 OR4C15Q8NGM1 316 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 FNDC8Q8TC99 324 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 NOX3Q9HBY0 568 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 NRIP3Q9NQ35 241 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 TMCC3Q9ULS5 477 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 MOKQ9UQ07 419 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 ADAM18Q9Y3Q7 739 aa16.81■□□□□ 0.28
SS18-208ENST00000577751 IGKV1D-43A0A0B4J1Z2 117 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 UNC119BA6NIH7 251 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 A6NIZ1 184 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 OR10H3O60404 316 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 ENTPD5O75356 428 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 OR8G3PP0DMU2 310 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 NR2C1P13056 603 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 PAX1P15863 534 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 FPR3P25089 353 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 IFNGR2P38484 337 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 GSSP48637 474 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 RASSF2P50749 326 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 ZNF84P51523 738 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 RAP1BP61224 184 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 RAP1AP62834 184 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 NAAAQ02083 359 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 GSG1Q2KHT4 349 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 THEM4Q5T1C6 240 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 SLC25A47Q6Q0C1 308 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 MYPOPQ86VE0 399 aaPredicted RBP16.8■□□□□ 0.28
SS18-208ENST00000577751 TMEM171Q8WVE6 324 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 NANOS1Q8WY41 292 aaKnown RBP16.8■□□□□ 0.28
SS18-208ENST00000577751 Q96M85 177 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 GRIP2Q9C0E4 1043 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 NDEL1Q9GZM8 345 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 DENND2DQ9H6A0 471 aaPredicted RBP16.8■□□□□ 0.28
SS18-208ENST00000577751 SEC61A2Q9H9S3 476 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 GRHPRQ9UBQ7 328 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 LAMP3Q9UQV4 416 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 POMPQ9Y244 141 aa16.8■□□□□ 0.28
SS18-208ENST00000577751 UGT2A1Q9Y4X1 527 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms