RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 MCHR2Q969V1 340 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 PERPQ96FX8 193 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF347Q96SE7 839 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 SEPHS2Q99611 448 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 KATNB1Q9BVA0 655 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 GRIP2Q9C0E4 1043 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 KRCC1Q9NPI7 259 aaPredicted RBP12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF701Q9NV72 531 aaPredicted RBP12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 B3GNT2Q9NY97 397 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF346Q9UL40 294 aaKnown RBP12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 MOKQ9UQ07 419 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 ATP23Q9Y6H3 246 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 ACANP16112 2415 aa12.03□□□□□ -0.48
HERPUD1-218ENST00000569569 TRBV4-1A0A0J9YWV2 114 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF503-AS2A6NEH8 195 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 OVOL3O00110 214 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 CDC42EP2O14613 210 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 GADD45GO95257 159 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 CD8AP01732 235 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 IGHMP01871 453 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 CECR9P0C854 216 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 CD79AP11912 226 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 NR2C1P13056 603 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 TTKP33981 857 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 OMPP47874 163 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 FABP6P51161 128 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF84P51523 738 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF133P52736 654 aaPredicted RBP12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 RPL27P61353 136 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 SPIBQ01892 262 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 NAAAQ02083 359 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 AGAP6Q5VW22 663 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 LCN8Q6JVE9 175 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF544Q6NX49 715 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 MDP1Q86V88 176 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 DHFR2Q86XF0 187 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 ZDHHC21Q8IVQ6 265 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 FBXL14Q8N1E6 418 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 SYT14Q8NB59 555 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 IL17RDQ8NFM7 739 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 OR4K5Q8NGD3 323 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 OR13C2Q8NGS9 318 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 HDAC2Q92769 488 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 POP5Q969H6 163 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 TRMT61AQ96FX7 289 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 FAM46AQ96IP4 442 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 FUZQ9BT04 418 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 TRAF4Q9BUZ4 470 aaPredicted RBP12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 TMUB1Q9BVT8 246 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 DENND2DQ9H6A0 471 aaPredicted RBP12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 TMEM38BQ9NVV0 291 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 AURKCQ9UQB9 309 aa12.02□□□□□ -0.49
HERPUD1-218ENST00000569569 CHD3Q12873 2000 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 FLNAP21333 2647 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 SH3PXD2BA1X283 911 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 ATP6V1G2-DDX39BF2Z307 99 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 MGRN1O60291 552 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 PTP4A3O75365 173 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 PDE5AO76074 875 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 UBOX5O94941 541 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 UBL3O95164 117 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 FARS2O95363 451 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 HLA-HP01893 362 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 OR8G3PP0DMU2 310 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 CD99P14209 185 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 ATP6V1B2P21281 511 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 APOBEC3AP31941 199 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 ACVR1BP36896 505 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 IDH3GP51553 393 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 MYBPC1Q00872 1141 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 MS4A2Q01362 244 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 PIGFQ07326 219 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 NPRL3Q12980 569 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 TOP3AQ13472 1001 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 SEC23BQ15437 767 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 GSG1Q2KHT4 349 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 NRN1LQ496H8 165 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 Q5PR19 223 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 C10orf128Q5T292 105 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 FAM205BPQ63HN1 556 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 B3GLCTQ6Y288 498 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 IGFN1Q86VF2 1251 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 KRTAP1-3Q8IUG1 177 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 MUC15Q8N387 334 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 SLC22A24Q8N4F4 322 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 WFDC11Q8NEX6 87 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 FNDC8Q8TC99 324 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 GTPBP3Q969Y2 492 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 RBP7Q96R05 134 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 KCNK17Q96T54 332 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 THTPAQ9BU02 230 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 ALG12Q9BV10 488 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 NDEL1Q9GZM8 345 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 CBLN4Q9NTU7 201 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF224Q9NZL3 707 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 SIGLEC7Q9Y286 467 aa12.01□□□□□ -0.49
HERPUD1-218ENST00000569569 TCRBV5S2A0A599 114 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 A6NIZ1 184 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 KRT36O76013 467 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms