RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SGTBQ96EQ0 304 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 ZNF347Q96SE7 839 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 DOK1Q99704 481 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 KCNS3Q9BQ31 491 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 RHNO1Q9BSD3 238 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 B3GAT2Q9NPZ5 323 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 POFUT2Q9Y2G5 429 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 HIF3AQ9Y2N7 669 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 UGT2A1Q9Y4X1 527 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 ANK2Q01484 3957 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 COL6A5A8TX70 2615 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 MALRD1Q5VYJ5 2156 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 BLOC1S5-TXNDC5H3BN57 136 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 hCG_2039718K7EN88 272 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 CXCR6O00574 342 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 DHHO43323 396 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 ATP8B1O43520 1251 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 TLX2O43763 284 aaPredicted RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 CCDC22O60826 627 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 TRMUO75648 421 aaKnown RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 UBL3O95164 117 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 OR6A2O95222 327 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 BCL10O95999 233 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 IFNA14P01570 189 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 IGHMP01871 453 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 MMP7P09237 267 aaPredicted RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 QDPRP09417 244 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 IGHV4-31P0DP07 118 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 CD79AP11912 226 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 BMP4P12644 408 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 ZNF26P17031 533 aaPredicted RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 NPR2P20594 1047 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 MAKP20794 623 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 DRD4P21917 467 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 PTDSS1P48651 473 aaKnown RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 NUDT2P50583 147 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 SEC24CP53992 1094 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 RAB1AP62820 205 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 PPP2R2BQ00005 443 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 PIGFQ07326 219 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 DAG1Q14118 895 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 C10orf128Q5T292 105 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 SPATA21Q7Z572 469 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 ZCCHC24Q8N2G6 241 aaKnown RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 PAQR4Q8N4S7 273 aaPredicted RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 FAM156AQ8NDB6 213 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 IL17RDQ8NFM7 739 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 GEMIN6Q8WXD5 167 aaKnown RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 HDAC2Q92769 488 aaKnown RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 MRPL24Q96A35 216 aaKnown RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 NABP1Q96AH0 204 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 TPD52L3Q96J77 140 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 HSH2DQ96JZ2 352 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 TNFRSF13CQ96RJ3 184 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 KCNK17Q96T54 332 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 SH3GL3Q99963 347 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 MRPL37Q9BZE1 423 aaKnown RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 DENND2DQ9H6A0 471 aaPredicted RBP6.74□□□□□ -1.33
CDH3-209ENST00000569080 INIPQ9NRY2 104 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 AP3M1Q9Y2T2 418 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 MED31Q9Y3C7 131 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 FKBP7Q9Y680 259 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 PMF1-BGLAPU3KQ54 211 aa6.74□□□□□ -1.33
CDH3-209ENST00000569080 A0A087WUU8 490 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 IGHV4-61A0A0C4DH41 118 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 NDUFS8O00217 210 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 CDC42EP2O14613 210 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 SNX3O60493 162 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 SLC2A10O95528 541 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 SNAP29O95721 258 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 RAB36O95755 333 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 SERPINA1P01009 418 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 HIST1H2ABP04908 130 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 IFNW1P05000 195 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 SERPINA5P05154 406 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 OR8G3PP0DMU2 310 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 ACADSP16219 412 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 ZNF16P17020 682 aaPredicted RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 USF1P22415 310 aaPredicted RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 GLRXP35754 106 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 NR4A2P43354 598 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 YAP1P46937 504 aaKnown RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 PDLIM4P50479 330 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 DAP3P51398 398 aaKnown RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 MRPS34P82930 218 aaKnown RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 MYBPC1Q00872 1141 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 FMODQ06828 376 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 ST3GAL3Q11203 375 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 RAB39AQ14964 217 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 LAPTM4AQ15012 233 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 IQCCQ4KMZ1 466 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 ALG10Q5BKT4 473 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 FOXL2NBQ6ZUU3 175 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 HIST3H2AQ7L7L0 130 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 MEX3DQ86XN8 651 aaKnown RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 NRMQ8IXM6 262 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 FAM86B1Q8N7N1 296 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 CLDN22Q8N7P3 220 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 SYT14Q8NB59 555 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 OR4K5Q8NGD3 323 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms