RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ALDH3B1P43353 468 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 SEC24CP53992 1094 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 RGS7BPQ6MZT1 257 aaPredicted RBP12.86□□□□□ -0.35
RNF40-209ENST00000566703 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 GLCCI1Q86VQ1 547 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 LRP11Q86VZ4 500 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 ZNF584Q8IVC4 421 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 OR4D11Q8NGI4 311 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 OR1J2Q8NGS2 313 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 FGFBP3Q8TAT2 258 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 SLC26A7Q8TE54 656 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 ZNF416Q9BWM5 594 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 NKIRAS2Q9NYR9 191 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.86□□□□□ -0.352e-7■■■□□ 16.6
RNF40-209ENST00000566703 SNAP29O95721 258 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 IGF2P01344 180 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 IGHG1P01857 330 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 OPN1SWP03999 348 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 QDPRP09417 244 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 PATE4P0C8F1 98 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 PGA4P0DJD7 388 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 PGA3P0DJD8 388 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 ZNF250P15622 560 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 TCN1P20061 433 aaPredicted RBP12.85□□□□□ -0.35
RNF40-209ENST00000566703 CD247P20963 164 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 PCGF2P35227 344 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 RAD52P43351 418 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 SRSF2Q01130 221 aaKnown RBP12.85□□□□□ -0.35
RNF40-209ENST00000566703 MOGQ16653 247 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 HIST3H3Q16695 136 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 SLC36A2Q495M3 483 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 METTL21CQ5VZV1 264 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 CCDC80Q76M96 950 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 RETREG3Q86VR2 466 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 RBM45Q8IUH3 476 aaKnown RBP12.85□□□□□ -0.35
RNF40-209ENST00000566703 SLC30A7Q8NEW0 376 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 CLDND2Q8NHS1 167 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 ZNF519Q8TB69 540 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 C11orf40Q8WZ69 217 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 MRPL13Q9BYD1 178 aaKnown RBP12.85□□□□□ -0.35
RNF40-209ENST00000566703 LRMDAQ9H2I8 198 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 RNF121Q9H920 327 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 INTS9Q9NV88 658 aaKnown RBP12.85□□□□□ -0.35
RNF40-209ENST00000566703 SLCO1C1Q9NYB5 712 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 SLC7A7Q9UM01 511 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 GRIP1Q9Y3R0 1128 aa12.85□□□□□ -0.35
RNF40-209ENST00000566703 IGLV3-9A0A075B6K5 115 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 A0A1W2PPW3 197 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 C17orf100A8MU93 164 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 SAGP10523 405 aaPredicted RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 ANPEPP15144 967 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 RBM34P42696 430 aaKnown RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 ZNF84P51523 738 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 ZNF133P52736 654 aaPredicted RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 MTPNP58546 118 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 PLP2Q04941 152 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 NFYCQ13952 458 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 CCNIQ14094 377 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 SELPLGQ14242 412 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 PCGF3Q3KNV8 242 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 HDDC2Q7Z4H3 204 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 TEX29Q8N6K0 151 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 LRRC17Q8N6Y2 441 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 OR10A6Q8NH74 314 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 SYNPRQ8TBG9 265 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 MCHR2Q969V1 340 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 TMEM186Q96B77 213 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 TAMM41Q96BW9 452 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 SEPHS2Q99611 448 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 SH3GL1Q99961 368 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 SH3GL3Q99963 347 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 PRSS27Q9BQR3 290 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 POLR2J2Q9GZM3 115 aaKnown RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 POLR2J3Q9H1A7 115 aaKnown RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 CDH20Q9HBT6 801 aa12.84□□□□□ -0.35
RNF40-209ENST00000566703 HINT3Q9NQE9 182 aaKnown RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 ZNF275Q9NSD4 429 aaPredicted RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 MYEF2Q9P2K5 600 aaKnown RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 STX18Q9P2W9 335 aaKnown RBP12.84□□□□□ -0.35
RNF40-209ENST00000566703 IQCMA0A1B0GVH7 501 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 HAX1O00165 279 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 RP2O75695 350 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 MT-ND1P03886 318 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 MSMBP08118 114 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 UMPSP11172 480 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 NAT2P11245 290 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 GZMMP51124 257 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 UCP2P55851 309 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 KLF3P57682 345 aaPredicted RBP12.83□□□□□ -0.36
RNF40-209ENST00000566703 CLRN1P58418 232 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 TEKQ02763 1124 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 MELKQ14680 651 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 NKPD1Q17RQ9 610 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 TBC1D28Q2M2D7 210 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 VMACQ2NL98 169 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 SLC16A14Q7RTX9 510 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms