RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CARD17Q5XLA6 110 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 NLRP9Q7RTR0 991 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 TMCO2Q7Z6W1 182 aaPredicted RBP2.41□□□□□ -2.02
UBR1-205ENST00000564540 PDCL2Q8N4E4 241 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 OR1L4Q8NGR5 311 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 OR1F12Q8NHA8 337 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 KCNG3Q8TAE7 436 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 SCFD1Q8WVM8 642 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 LINC00477Q96M19 166 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 MTMR9Q96QG7 549 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 PANX1Q96RD7 426 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 MCCC2Q9HCC0 563 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 SLCO1B3Q9NPD5 702 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 ZNF629Q9UEG4 869 aaPredicted RBP2.41□□□□□ -2.02
UBR1-205ENST00000564540 RPH3ALQ9UNE2 315 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 RPL36Q9Y3U8 105 aaKnown RBP2.41□□□□□ -2.02
UBR1-205ENST00000564540 MROH5Q6ZUA9 1318 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 A0A1B0GVL5 298 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 PLAC8L1A1L4L8 177 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 C12orf77C9JDV5 145 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 LOC110117498-PIK3R3F6TDL0 507 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 B4GALT5O43286 388 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 RNF13O43567 381 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 WBP4O75554 376 aaKnown RBP2.4□□□□□ -2.03
UBR1-205ENST00000564540 NDUFB10O96000 172 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 OR8G3PP0DMU2 310 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 MMP11P24347 488 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 CCT6AP40227 531 aaKnown RBP2.4□□□□□ -2.03
UBR1-205ENST00000564540 SYKP43405 635 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 TPMTP51580 245 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 CDH4P55283 916 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 C1orf61Q13536 156 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 GANABQ14697 944 aaKnown RBP2.4□□□□□ -2.03
UBR1-205ENST00000564540 OR4F3Q6IEY1 312 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 OR2A2Q6IF42 318 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 OR52E8Q6IFG1 317 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 LCN12Q6JVE5 192 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 NANOGP8Q6NSW7 305 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 UQCC3Q6UW78 93 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 CCDC80Q76M96 950 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 EGFL6Q8IUX8 553 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 FAM184AQ8NB25 1140 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 MFSD9Q8NBP5 474 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 DNAJC19Q96DA6 116 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 TM4SF19Q96DZ7 209 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 RPRD1AQ96P16 312 aaPredicted RBP2.4□□□□□ -2.03
UBR1-205ENST00000564540 GSDMAQ96QA5 445 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 C11orf70Q9BRQ4 267 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 SLC39A3Q9BRY0 314 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 NDFIP1Q9BT67 221 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 LRRN3Q9H3W5 708 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 RBKSQ9H477 322 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 CLSTN2Q9H4D0 955 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 ANKRA2Q9H9E1 313 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 MARCOQ9UEW3 520 aaPredicted RBP2.4□□□□□ -2.03
UBR1-205ENST00000564540 COPS3Q9UNS2 423 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 POLDIP2Q9Y2S7 368 aa2.4□□□□□ -2.03
UBR1-205ENST00000564540 LRP5LA4QPB2 252 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 C12orf71A8MTZ7 269 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 PEX7O00628 323 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 BET1O15155 118 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 SLC31A2O15432 143 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 SCGNO76038 276 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 C6orf47O95873 294 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 KRT14P02533 472 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 CRYGBP07316 175 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 CISD3P0C7P0 127 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 HPGDP15428 266 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 MUC1P15941 1255 aaPredicted RBP2.39□□□□□ -2.03
UBR1-205ENST00000564540 CELP19835 753 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 GSSP48637 474 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 ETV1P50549 477 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 STK11Q15831 433 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 SGCAQ16586 387 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 UBE2SQ16763 222 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 ALKBH6Q3KRA9 238 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 SFT2D3Q587I9 215 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 C6orf226Q5I0X4 101 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 SPANXN2Q5MJ10 180 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 LYPD2Q6UXB3 125 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 C19orf35Q6ZS72 473 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 PGAP1Q75T13 922 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 OTUD6AQ7L8S5 288 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 DHDDSQ86SQ9 333 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 ZNF546Q86UE3 836 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 THOC6Q86W42 341 aaKnown RBP2.39□□□□□ -2.03
UBR1-205ENST00000564540 SPATA4Q8NEY3 305 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 BPIFCQ8NFQ6 507 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 EXOSC8Q96B26 276 aaKnown RBP2.39□□□□□ -2.03
UBR1-205ENST00000564540 LRRC58Q96CX6 371 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 RMI2Q96E14 147 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 C7orf34Q96L11 122 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 RBM14Q96PK6 669 aaKnown RBP2.39□□□□□ -2.03
UBR1-205ENST00000564540 SLC38A2Q96QD8 506 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 CHP1Q99653 195 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 BPIFA3Q9BQP9 254 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 PARD6BQ9BYG5 372 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 NEK6Q9HC98 313 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 SLC40A1Q9NP59 571 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 ZNF222Q9UK12 451 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms