RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 LIPHQ8WWY8 451 aa17.27■□□□□ 0.36
SHCBP1-203ENST00000564272 GEMIN6Q8WXD5 167 aaKnown RBP17.27■□□□□ 0.36
SHCBP1-203ENST00000564272 HSH2DQ96JZ2 352 aa17.27■□□□□ 0.36
SHCBP1-203ENST00000564272 SH3GL3Q99963 347 aa17.27■□□□□ 0.36
SHCBP1-203ENST00000564272 KCTD14Q9BQ13 255 aaPredicted RBP17.27■□□□□ 0.36
SHCBP1-203ENST00000564272 FKBP7Q9Y680 259 aa17.27■□□□□ 0.36
SHCBP1-203ENST00000564272 SONP18583 2426 aaKnown RBP17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 FFAR1O14842 300 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 GPRIN2O60269 458 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 TRMUO75648 421 aaKnown RBP17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 TSPAN19P0C672 248 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 DAP3P51398 398 aaKnown RBP17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 PSME3P61289 254 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 RAB1AP62820 205 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 RAB39AQ14964 217 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 HIST3H3Q16695 136 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 IFI44LQ53G44 452 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 SYT14Q8NB59 555 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 RBM15BQ8NDT2 890 aaKnown RBP17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 IL17RDQ8NFM7 739 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 MCHR2Q969V1 340 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 BPIFA2Q96DR5 249 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 FNDC11Q9BVV2 318 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 MRPL13Q9BYD1 178 aaKnown RBP17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 ABCD2Q9UBJ2 740 aa17.26■□□□□ 0.35
SHCBP1-203ENST00000564272 SNX3O60493 162 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 TP53P04637 393 aaPredicted RBP17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 CSF3P09919 207 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 OR8G3PP0DMU2 310 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 ZNF35P13682 527 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 ACADSP16219 412 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 SLC25A16P16260 332 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 MAKP20794 623 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 NR4A1P22736 598 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 IFNA8P32881 189 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 PPOXP50336 477 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 GYS2P54840 703 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 TOP3AQ13472 1001 aaPredicted RBP17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 LAPTM4AQ15012 233 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 MSMPQ1L6U9 139 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 ARMC4Q5T2S8 1044 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 FKBP9P1Q75LS8 142 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 ZNF584Q8IVC4 421 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 NRMQ8IXM6 262 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 CDK20Q8IZL9 346 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 OR4K5Q8NGD3 323 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 FAM162AQ96A26 154 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 CMTM5Q96DZ9 223 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 SEPHS2Q99611 448 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 NSRP1Q9H0G5 558 aaKnown RBP17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 HIF3AQ9Y2N7 669 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 ABCA2Q9BZC7 2435 aa17.25■□□□□ 0.35
SHCBP1-203ENST00000564272 CD5LO43866 347 aa17.24■□□□□ 0.35
SHCBP1-203ENST00000564272 SLC2A10O95528 541 aa17.24■□□□□ 0.35
SHCBP1-203ENST00000564272 LSP1P33241 339 aa17.24■□□□□ 0.35
SHCBP1-203ENST00000564272 TRAM2Q15035 370 aa17.24■□□□□ 0.35
SHCBP1-203ENST00000564272 HDDC2Q7Z4H3 204 aa17.24■□□□□ 0.35
SHCBP1-203ENST00000564272 IGFN1Q86VF2 1251 aa17.24■□□□□ 0.35
SHCBP1-203ENST00000564272 HDAC2Q92769 488 aaKnown RBP17.24■□□□□ 0.35
SHCBP1-203ENST00000564272 DENND2DQ9H6A0 471 aaPredicted RBP17.24■□□□□ 0.35
SHCBP1-203ENST00000564272 JMJD1CQ15652 2540 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 TRAV27A0A087WT01 109 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 TMEM129A0AVI4 362 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 NDUFAB1O14561 156 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 PRSS23O95084 383 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 FARS2O95363 451 aaKnown RBP17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 SAGP10523 405 aaPredicted RBP17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 PRDX6P30041 224 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 PDLIM4P50479 330 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 ZNF84P51523 738 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 FMODQ06828 376 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 CARTPTQ16568 116 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 ALG10Q5BKT4 473 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 PRIMA1Q86XR5 153 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 ZCCHC24Q8N2G6 241 aaKnown RBP17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 DOK1Q99704 481 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 TXNIPQ9H3M7 391 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 SPAG4Q9NPE6 437 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 EGFL7Q9UHF1 273 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 FBXL3Q9UKT7 428 aa17.23■□□□□ 0.35
SHCBP1-203ENST00000564272 IGKV1D-43A0A0B4J1Z2 117 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 SH3PXD2BA1X283 911 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 VSTM5A8MXK1 200 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 CENPBD1B2RD01 187 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 ENTPD5O75356 428 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 SERPINA5P05154 406 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 ZNF133P52736 654 aaPredicted RBP17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 GNGT1P63211 74 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 PRKCDQ05655 676 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 LOXL1Q08397 574 aaPredicted RBP17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 TMEM249Q2WGJ8 235 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 C10orf128Q5T292 105 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 GKAP1Q5VSY0 366 aaPredicted RBP17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 TBPL2Q6SJ96 375 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 ZNF730Q6ZMV8 503 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 SLC16A14Q7RTX9 510 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 TSEN54Q7Z6J9 526 aaKnown RBP17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 CPLX4Q7Z7G2 160 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 OR13C2Q8NGS9 318 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 OR51A7Q8NH64 312 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms