RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 TM9SF4Q92544 642 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 HAS2Q92819 552 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 UFD1Q92890 307 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 KLHL15Q96M94 604 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 SFXN2Q96NB2 322 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 OXGR1Q96P68 337 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 OR5M11Q96RB7 305 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 UBL7Q96S82 380 aaPredicted RBP8.69□□□□□ -1.02
UBFD1-202ENST00000563366 NPAS1Q99742 590 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 COQ7Q99807 217 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 ALG12Q9BV10 488 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 ALG8Q9BVK2 526 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 CXorf56Q9H5V9 222 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 ZNF703Q9H7S9 590 aaPredicted RBP8.69□□□□□ -1.02
UBFD1-202ENST00000563366 TIGARQ9NQ88 270 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 ASB6Q9NWX5 421 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 TAS2R16Q9NYV7 291 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 CLEC2DQ9UHP7 191 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 ZFHX2Q9C0A1 2572 aaPredicted RBP8.69□□□□□ -1.02
UBFD1-202ENST00000563366 FAM186AA6NE01 2351 aa8.69□□□□□ -1.02
UBFD1-202ENST00000563366 GVINP1Q7Z2Y8 2422 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 RIF1Q5UIP0 2472 aaKnown RBP8.68□□□□□ -1.02
UBFD1-202ENST00000563366 TRABD2BA6NFA1 517 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 HSPB2A8KAH6 182 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 ZNF670-ZNF695F2Z2N8 137 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 MS4A18H0YCH9 400 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SMAD7O15105 426 aaKnown RBP8.68□□□□□ -1.02
UBFD1-202ENST00000563366 TLX3O43711 291 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-202ENST00000563366 EFNA2O43921 213 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 AKR7A3O95154 331 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 APOL3O95236 402 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 HPNP05981 417 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 GYPBP06028 91 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SP1P08047 785 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 PRKAR1AP10644 381 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 CLUP10909 449 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 CPEP16870 476 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 ZNF43P17038 809 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 GALP22466 123 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SFTPDP35247 375 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 LIPAP38571 399 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 RAC3P60763 192 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 ARG2P78540 354 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 GLO1Q04760 184 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 NFATC3Q12968 1075 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 TPBGQ13641 420 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 HSPB2Q16082 182 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 CTF1Q16619 201 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 TSTQ16762 297 aaKnown RBP8.68□□□□□ -1.02
UBFD1-202ENST00000563366 HYAL4Q2M3T9 481 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 MS4A18Q3C1V0 323 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SPINK14Q6IE38 97 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 C19orf48Q6RUI8 117 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 ZNF322Q6U7Q0 402 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-202ENST00000563366 LINC00299Q6ZSB3 139 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 USP43Q70EL4 1123 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SHFQ7M4L6 423 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SLC16A9Q7RTY1 509 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 KCTD20Q7Z5Y7 419 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 LHFPL3Q86UP9 236 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 ZBTB46Q86UZ6 589 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SLC35F2Q8IXU6 374 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 EXD3Q8N9H8 876 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 FAM83FQ8NEG4 500 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-202ENST00000563366 ASB10Q8WXI3 467 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 ZMYND19Q96E35 227 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-202ENST00000563366 OPALINQ96PE5 141 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SIGLEC12Q96PQ1 595 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 SYT4Q9H2B2 425 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 TMEM185BQ9H7F4 350 aa8.68□□□□□ -1.02
UBFD1-202ENST00000563366 PAQR5Q9NXK6 330 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-202ENST00000563366 CFAP54Q96N23 3096 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 SLC22A23A1A5C7 686 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 NCKAP5O14513 1909 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 TRAPPC6AO75865 159 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 IGHG1P01857 330 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 MRPL3P09001 348 aaKnown RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 TACSTD2P09758 323 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 IFNGR1P15260 489 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 POU3F2P20265 443 aaPredicted RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 IL11P20809 199 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 TCEA1P23193 301 aaKnown RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 GABRA5P31644 462 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 UGT2B10P36537 528 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 GPR85P60893 370 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 H3F3AP84243 136 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 PLGLB1Q02325 96 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 FOXO1Q12778 655 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 RSPO4Q2I0M5 234 aaPredicted RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 LINC01590Q5TEZ4 76 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 OR2G6Q5TZ20 316 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 PLEKHG7Q6ZR37 379 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 FAM220AQ7Z4H9 259 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 SLC22A16Q86VW1 577 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 PHC2Q8IXK0 858 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 MRPL41Q8IXM3 137 aaKnown RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 PM20D2Q8IYS1 436 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 TMEM99Q8N816 258 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 FAM169BQ8N8A8 192 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 OR5M1Q8NGP8 315 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms