RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 LSM11P83369 360 aaKnown RBP eCLIP14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 RAB39AQ14964 217 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 MSMPQ1L6U9 139 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 C6orf52Q5T4I8 152 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 PIWIL3Q7Z3Z3 882 aaKnown RBP14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 MEX3DQ86XN8 651 aaKnown RBP14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZCCHC24Q8N2G6 241 aaKnown RBP14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 SYT14Q8NB59 555 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 IL17RDQ8NFM7 739 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 LZICQ8WZA0 190 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 SH3GL3Q99963 347 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 PIMREGQ9BSJ6 248 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 DYNLRB1Q9NP97 96 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 INIPQ9NRY2 104 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 RHCGQ9UBD6 479 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 SNX13Q9Y5W8 968 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 TMEM129A0AVI4 362 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 SH3PXD2BA1X283 911 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 J3KTA2 159 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 CXCR6O00574 342 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 CCDC22O60826 627 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF682O95780 498 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 IGF2P01344 180 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 OR8G3PP0DMU2 310 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 IFI30P13284 250 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF35P13682 527 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 GSK3BP49841 420 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 DAP3P51398 398 aaKnown RBP14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 ST3GAL3Q11203 375 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 TOP3AQ13472 1001 aaPredicted RBP14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 GGTLC2Q14390 218 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF584Q8IVC4 421 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 OFCC1Q8IZS5 231 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 OR4K5Q8NGD3 323 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 MCHR2Q969V1 340 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 DOK1Q99704 481 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 MAN2C1Q9NTJ4 1040 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 AP3M1Q9Y2T2 418 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 COL6A5A8TX70 2615 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 MXRA5Q9NR99 2828 aa14.84□□□□□ -0.03
CDC42BPB-208ENST00000561271 A8MV72 311 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 VWC2LB2RUY7 222 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 GSTA4O15217 222 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 TRMUO75648 421 aaKnown RBP14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 FARS2O95363 451 aaKnown RBP14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 SLC2A10O95528 541 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 IFNW1P05000 195 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 IGFBP1P08833 259 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 ACADSP16219 412 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 USF1P22415 310 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 VLDLRP98155 873 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 GALK2Q01415 458 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 FMODQ06828 376 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 HIST3H3Q16695 136 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 C8orf82Q6P1X6 216 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 HDDC2Q7Z4H3 204 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 LIPHQ8WWY8 451 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 HSH2DQ96JZ2 352 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 SEPHS2Q99611 448 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 MRPL13Q9BYD1 178 aaKnown RBP14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 MRPL37Q9BZE1 423 aaKnown RBP14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 FAM107BQ9H098 131 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 RAB1BQ9H0U4 201 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 TPK1Q9H3S4 243 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 CMAHPQ9Y471 501 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 CUBNO60494 3623 aa14.83□□□□□ -0.04
CDC42BPB-208ENST00000561271 VSTM5A8MXK1 200 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 NDUFS8O00217 210 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 SERPINA1P01009 418 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 TSPAN19P0C672 248 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 NCK1P16333 377 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 NR4A2P43354 598 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 ZNF84P51523 738 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 SEC24CP53992 1094 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 IFI44LQ53G44 452 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 ARMC4Q5T2S8 1044 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 GKAP1Q5VSY0 366 aaPredicted RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 IGFN1Q86VF2 1251 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 NRMQ8IXM6 262 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 PAQR4Q8N4S7 273 aaPredicted RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 RBM15BQ8NDT2 890 aaKnown RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 GEMIN6Q8WXD5 167 aaKnown RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 HDAC2Q92769 488 aaKnown RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 MRPL24Q96A35 216 aaKnown RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 BPIFA2Q96DR5 249 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 FOXN4Q96NZ1 517 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 HOPXQ9BPY8 73 aaPredicted RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 ELAC2Q9BQ52 826 aaKnown RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 SYT3Q9BQG1 590 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 DENND2DQ9H6A0 471 aaPredicted RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 EFCAB1Q9HAE3 211 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 MYOZ1Q9NP98 299 aaPredicted RBP14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 FBXL3Q9UKT7 428 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 FZR1Q9UM11 496 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 HIF3AQ9Y2N7 669 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 SPEF1Q9Y4P9 236 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 WNK2Q9Y3S1 2297 aa14.82□□□□□ -0.04
CDC42BPB-208ENST00000561271 TRAV27A0A087WT01 109 aa14.81□□□□□ -0.04
CDC42BPB-208ENST00000561271 IGHV4-61A0A0C4DH41 118 aa14.81□□□□□ -0.04
CDC42BPB-208ENST00000561271 LOC390937A0A1W2PQ73 354 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms