RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 NR2C1P13056 603 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 CTLA4P16410 223 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF43P17038 809 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 PTGS2P35354 604 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 HCCSP53701 268 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 GFRA1P56159 465 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 RPS25P62851 125 aaKnown RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 ROR2Q01974 943 aaKnown RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 GLO1Q04760 184 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 RUNX1T1Q06455 604 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 EGR3Q06889 387 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 DYNC1I2Q13409 638 aaKnown RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 HSPB2Q16082 182 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF684Q5T5D7 378 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF454Q8N9F8 522 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 SMAP2Q8WU79 429 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 ASB17Q8WXJ9 295 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 SCMH1Q96GD3 660 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 SLC25A44Q96H78 314 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 TXNDC15Q96J42 360 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 RBP7Q96R05 134 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 SF3B5Q9BWJ5 86 aaKnown RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF552Q9H707 407 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 TXNL4BQ9NX01 149 aaKnown RBP15.3■□□□□ 0.04
HDDC3-206ENST00000561036 MED29Q9NX70 200 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 COPS3Q9UNS2 423 aa15.3■□□□□ 0.04
HDDC3-206ENST00000561036 A6NL46 340 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 VGLL3A8MV65 326 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 TLX3O43711 291 aaPredicted RBP15.29■□□□□ 0.04
HDDC3-206ENST00000561036 SULT1C4O75897 302 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 HRGP04196 525 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 CD97P48960 835 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 TGM4P49221 684 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 MOGQ16653 247 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 SOWAHCQ53LP3 525 aaPredicted RBP15.29■□□□□ 0.04
HDDC3-206ENST00000561036 WIPI1Q5MNZ9 446 aaPredicted RBP15.29■□□□□ 0.04
HDDC3-206ENST00000561036 PDSS1Q5T2R2 415 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 DMKNQ6E0U4 476 aaPredicted RBP15.29■□□□□ 0.04
HDDC3-206ENST00000561036 LYPD4Q6UWN0 246 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 IGFL2Q6UWQ7 119 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 GPAT4Q86UL3 456 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 GGNQ86UU5 652 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 ZFP41Q8N8Y5 198 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 OR2V1Q8NHB1 315 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 PELI1Q96FA3 418 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 KCTD7Q96MP8 289 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 MED18Q9BUE0 208 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 TTTY12Q9BZ98 90 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 SLIRPQ9GZT3 109 aaKnown RBP15.29■□□□□ 0.04
HDDC3-206ENST00000561036 RERGLQ9H628 205 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 TIGARQ9NQ88 270 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 KLHL9Q9P2J3 617 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 LAMP5Q9UJQ1 280 aa15.29■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF292O60281 2723 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 TVP23AA6NH52 213 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 METTL15A6NJ78 407 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF726A6NNF4 738 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF814B7Z6K7 855 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 TNFSF11O14788 317 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 IL1AP01583 271 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 PGA4P0DJD7 388 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 PGA3P0DJD8 388 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 WT1P19544 449 aaPredicted RBP15.28■□□□□ 0.04
HDDC3-206ENST00000561036 POU3F2P20265 443 aaPredicted RBP15.28■□□□□ 0.04
HDDC3-206ENST00000561036 ALOX5APP20292 161 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 SOX6P35712 828 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 TGFBR1P36897 503 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 CARD18P57730 90 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 CLRN1P58418 232 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 SIRPAP78324 504 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 ARG2P78540 354 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 FABP5Q01469 135 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 SRSF6Q13247 344 aaKnown RBP15.28■□□□□ 0.04
HDDC3-206ENST00000561036 TP53I3Q53FA7 332 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 TEX30Q5JUR7 227 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 HBMQ6B0K9 141 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 VASNQ6EMK4 673 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 RPL22L1Q6P5R6 122 aaKnown RBP15.28■□□□□ 0.04
HDDC3-206ENST00000561036 FAM220AQ7Z4H9 259 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 MS4A15Q8N5U1 240 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 RFLNBQ8N5W9 214 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 SYT14Q8NB59 555 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 TMEM178AQ8NBL3 297 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 NOXO1Q8NFA2 376 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 OR6N2Q8NGY6 317 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 OTOSQ8NHW6 89 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 TMEM203Q969S6 136 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 ADGRG7Q96K78 797 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 HES7Q9BYE0 225 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 NXF2Q9GZY0 626 aaKnown RBP15.28■□□□□ 0.04
HDDC3-206ENST00000561036 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDDC3-206ENST00000561036 MMP27Q9H306 513 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 RNF167Q9H6Y7 350 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 ST6GALNAC2Q9UJ37 374 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 GNG8Q9UK08 70 aa15.28■□□□□ 0.04
HDDC3-206ENST00000561036 SIRT4Q9Y6E7 314 aaPredicted RBP15.28■□□□□ 0.04
HDDC3-206ENST00000561036 PNMA8CA0A1B0GUJ8 204 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 SLC35F4A4IF30 521 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 E9PI62 339 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 ZNF593O00488 134 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms