RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RAB39AQ14964 217 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 RNPS1Q15287 305 aaKnown RBP7.67□□□□□ -1.18
TRAF3-209ENST00000560463 SF3B4Q15427 424 aaKnown RBP eCLIP7.67□□□□□ -1.18
TRAF3-209ENST00000560463 HIST3H3Q16695 136 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 PLEKHN1Q494U1 663 aaPredicted RBP7.67□□□□□ -1.18
TRAF3-209ENST00000560463 NADK2Q4G0N4 442 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 LINC01590Q5TEZ4 76 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF367Q7RTV3 350 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 SIAH3Q8IW03 269 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 OR6V1Q8N148 313 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 NOXO1Q8NFA2 376 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 OR4F15Q8NGB8 312 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 OR6K6Q8NGW6 343 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 OR2T27Q8NH04 317 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 ZPLD1Q8TCW7 415 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 ZCCHC14Q8WYQ9 949 aaKnown RBP7.67□□□□□ -1.18
TRAF3-209ENST00000560463 MUL1Q969V5 352 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 RELTQ969Z4 430 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 WDYHV1Q96HA8 205 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 TXNDC15Q96J42 360 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 UCN2Q96RP3 112 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 CNN2Q99439 309 aaKnown RBP7.67□□□□□ -1.18
TRAF3-209ENST00000560463 ARHGAP9Q9BRR9 750 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 PRDM14Q9GZV8 571 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 MARCH7Q9H992 704 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 ADGRL4Q9HBW9 690 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 GP6Q9HCN6 339 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 MED29Q9NX70 200 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 EMC3Q9P0I2 261 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 KLHL9Q9P2J3 617 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 KLHL13Q9P2N7 655 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 RCE1Q9Y256 329 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 TP53TG5Q9Y2B4 290 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF175Q9Y473 711 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 LIPGQ9Y5X9 500 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 MYO7BQ6PIF6 2116 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 SHANK1Q9Y566 2161 aa7.67□□□□□ -1.18
TRAF3-209ENST00000560463 IGLV1-36A0A0B4J1U3 117 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 IGHV3-15A0A0B4J1V0 119 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 DAPL1A0PJW8 107 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 OR6C65A6NJZ3 312 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF724A8MTY0 619 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 C12orf71A8MTZ7 269 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 H7C1C5 153 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 TAF4O00268 1085 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 DCTN6O00399 190 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 PHYHO14832 338 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 SLC16A7O60669 478 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 RAMP1O60894 148 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 KHDRBS3O75525 346 aaKnown RBP7.66□□□□□ -1.18
TRAF3-209ENST00000560463 SEC14L2O76054 403 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 HRGP04196 525 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 LIMS3P0CW19 117 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 LIMS4P0CW20 117 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 FCGR2AP12318 317 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 MAP2K4P45985 399 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF133P52736 654 aaPredicted RBP7.66□□□□□ -1.18
TRAF3-209ENST00000560463 WNT4P56705 351 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 CLDN17P56750 224 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 LCN6P62502 163 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 SRYQ05066 204 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 CAMK2DQ13557 499 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 GALEQ14376 348 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 SPHARQ15513 63 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 KRTCAP3Q53RY4 240 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 TMPRSS11AQ6ZMR5 421 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 SLC16A9Q7RTY1 509 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 SATL1Q86VE3 508 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 KLHL36Q8N4N3 616 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 OR13F1Q8NGS4 319 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 OR52N1Q8NH53 320 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 RNF128Q8TEB7 428 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 ZNRF4Q8WWF5 429 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 TMEM45BQ96B21 275 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 ZMYND19Q96E35 227 aaPredicted RBP7.66□□□□□ -1.18
TRAF3-209ENST00000560463 TSSK2Q96PF2 358 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 TAAR6Q96RI8 345 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 EMC6Q9BV81 110 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 PRRG4Q9BZD6 226 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 YIPF3Q9GZM5 350 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 ISYNA1Q9NPH2 558 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 PARPBPQ9NWS1 579 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 ERVK13-1Q9NX77 482 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 SPRR3Q9UBC9 169 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 LHX6Q9UPM6 363 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 CAB39Q9Y376 341 aaPredicted RBP7.66□□□□□ -1.18
TRAF3-209ENST00000560463 FLVCR1Q9Y5Y0 555 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 TMEM14AQ9Y6G1 99 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 RTTNQ86VV8 2226 aa7.66□□□□□ -1.18
TRAF3-209ENST00000560463 K7EM74 188 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF701M0R085 212 aaPredicted RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 SLC43A1O75387 559 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF432O94892 652 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 PTHP01270 115 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 CTLA4P16410 223 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 KLK2P20151 261 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 PYCR1P32322 319 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 CSNK1A1P48729 337 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ETV1P50549 477 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 GP2P55259 537 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms